Clarias gariepinus (North African catfish): 128545019
Help
Entry
128545019 CDS
T10780
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128545019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128545019
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Serotonin (5-HT3)
128545019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
EcpD_mid
Muc_B2
Motif
Other DBs
NCBI-GeneID:
128545019
NCBI-ProteinID:
XP_053371324
LinkDB
All DBs
Position
16:complement(19272035..19279621)
Genome browser
AA seq
405 aa
AA seq
DB search
MSSTQRNPKFLITVSFLLVFLEPTTTCESPRSLAKYLISQKLFSAPQDLDCVTALNLTSI
QYETLSVDTETMAFSSRIKIAMTWIDPGLSWKLANYTFDKIILPVSKIWTPDLTVVNAIY
VKVKPVTNDVVVKYDGTVNYAIVMYTTVICKFNLLTYPFVKGSCPVAINGWNQSSCGLNI
QYGSVSTVGGEGAEWSTLSVNLTTDNTNNHNYIYVTMSSNPFKAMVSLVLPSALIMIADL
VSFALPLDGGKRSSFKITLVLSFTMFLVILTDNLPSSGPCSPLLRYHFCFCLFVLVLSML
ISMVFTKVASDGNILCSRLPKLSKPDETGTQLADMIVDGQAIKKIVNFVEKMDKKDSEMK
KKQMLANKLDKACFWGYLLLDVIYSVCVIAFTKTDSCEANNFDFW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccacacagagaaacccgaaattcctcattactgtgtctttcctccttgtcttc
ctagaacccacaacaacgtgtgaatcacctcgaagcctggctaaatatctcattagccaa
aagttgttcagtgcaccacaagatctggactgtgttactgctctgaacctcacctccatc
cagtatgagacactgtctgttgacactgaaactatggcgttctctagccgcattaaaatt
gccatgacatggattgaccctggcctttcatggaaactggcaaattacacatttgacaaa
atcattttgcctgttagcaaaatatggactcctgatctcactgtggtgaatgcaatatat
gtgaaggtaaaacctgttactaacgacgtagtggtgaaatatgatggcactgtgaactac
gccattgtcatgtacaccacggtcatttgcaaattcaaccttctcacctacccttttgtt
aaaggctcatgtcctgtagccatcaacggatggaaccaaagctcttgtgggctgaatatc
cagtatggctcagtatctactgtaggaggtgaaggagctgaatggagcactttgtcagtg
aacctgacaacggacaatacaaacaaccacaactatatctatgtcactatgtccagcaac
ccctttaaagcaatggtgtcactggtcctgccaagcgcactaatcatgatagctgatcta
gtgagttttgctttgccactggatgggggaaagcgcagctctttcaaaatcacactggtg
ctcagcttcaccatgttcctcgttatcctcactgataaccttcctagcagtggaccatgc
agccctctgttgcgttatcacttctgcttctgcttgtttgttcttgtgctgagtatgctg
atatccatggtgttcaccaaggtggcatcagatggcaacattctgtgttccagacttcca
aagctgagtaaaccagatgaaactggaacacaattagccgacatgattgtagatgggcaa
gctatcaagaagattgtgaattttgtggaaaaaatggataaaaaggacagcgagatgaag
aaaaagcaaatgttggcaaacaaactggacaaagcctgtttttggggatatttgctcctc
gatgtcatttacagtgtttgtgtgattgcttttaccaaaacagattcttgtgaggctaac
aatttcgatttctggtaa
DBGET
integrated database retrieval system
