Clarias gariepinus (North African catfish): 128545020
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Entry
128545020 CDS
T10780
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128545020 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128545020 (gfap)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
128545020 (gfap)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
128545020 (gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Myosin_tail_1
DUF1664
GAS
BLOC1_2
YwqH-like
DUF7491
TolA_bind_tri
OHA
TPR_MLP1_2
CCDC138_cc
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
128545020
NCBI-ProteinID:
XP_053371325
LinkDB
All DBs
Position
16:5412718..5421360
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AA seq
440 aa
AA seq
DB search
MDSQRVLSSYRKRFGTQSSPSAPLITRSLGRLSLHSTPRHTVLSSPSVSRLSLGTERLDF
STDSLLKAQYRETRTNEKVEMMGLNDRFASYIEKVRFLEQQNKVLVAELNQLRGKEPSRL
GDIYQEELRELRRQVDGLNNAKARLEIERDNLAADLGTLKQRLQDETTLRQDAENSLNAF
RQDVDEAALNRVQLERKIEALQDEINFLKKVHEEEMRELQDQLNAQQVHVDLDVSKPDLT
AALREIRVQYEAMATSNMQETEEWYRSKFADLTEAANRNAEALRQAKQEANDYRRQIQAL
TCDLESLRGTNDSLERQLREIEERFSTDTAAYQDTVARLEDEIQGLKEEMARHLQEYQDL
LNVKLALDIEIATYRKLLEGEESRITVPVQSFANIQFRETSIDTKTPPESLTKRSIIVRT
VETRDGEIIKESTSERKELP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggatagccagcgtgtcctctcgtcttaccgtaagcgttttgggactcagagcagcccc
tcggccccgctcatcaccaggagcctcgggcgtctgtccctgcacagcaccccacgccac
acggtcctgtccagccccagcgtttcccgtctgtccctgggaaccgagaggctcgacttc
tctacggactcgctgctgaaggctcagtaccgtgagacgcgcaccaatgagaaggtggag
atgatgggcctgaatgaccgcttcgccagctatatcgagaaagtgcgtttcctggaacag
cagaacaaggtactggtggctgaactgaatcagctacgtgggaaggagccgagccggctt
ggggacatctaccaagaggaactgagggagctgcgcagacaggtggatggcttgaacaat
gccaaggcacggctggagattgagagggacaacctggcggctgatttgggcacactgaag
caaagacttcaggatgaaacaacgctgagacaagatgcagaaaacagcctgaatgcattc
agacaggatgtggacgaggcggctctgaacagggtgcagctggagcggaagatcgaagct
ctccaggacgagatcaatttcctgaagaaagtccacgaggaggagatgcgggagctgcag
gaccagttgaacgcccagcaggtccacgtggatctggacgtgtctaaaccggacctgact
gcggcactaagggagatccgggttcagtacgaggccatggcgacctccaacatgcaggag
actgaggagtggtaccgctccaagtttgcggatctgaccgaagcggccaatcggaacgca
gaggctctgcggcaggcgaagcaggaggccaacgattaccgcagacagattcaggccctg
acgtgtgacctggagtctctgcgtggaaccaatgactctctggagcgacagctgcgtgag
atcgaggagcgtttctccacggacacggcggcctaccaggacacggtggcgcgccttgag
gacgagatccagggtctgaaggaggagatggcgcgacacctgcaggagtaccaggacctc
ctcaacgtcaaactggcactggacatcgagattgccacctacaggaagctgctggaggga
gaggagagccggatcactgttcctgtgcagagtttcgccaacattcagttcagagagacc
agcattgacactaaaacccctcctgagagtctcactaagaggagcatcatcgtacgaact
gtggagacgcgtgatggagagatcataaaggagtcgacctcggagcgaaaggagctgccg
taa
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