Clarias gariepinus (North African catfish): 128545064
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Entry
128545064 CDS
T10780
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128545064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128545064
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128545064
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
128545064
NCBI-ProteinID:
XP_053371376
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Position
16:23618451..23651593
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AA seq
1174 aa
AA seq
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MVLADSDLESLSPVESDDLSGSDEDFEPNMRKTKRKKGPAPGDTVTLSKRPRRTAGSTSS
PSLTPSPGASRTTKHTPAPQPETDRAERRKTGNMFVAVRSGRSALVTVIDEWLDDYKQDR
KEGLRELLNFVVECCGCKGSVTRAMFDSMQNADIISHLTKEFNEDSVSYPLAAGGSQGRR
FRDGLCEWVCQLVQRCRHSLLYDEFLFSSLIAFLTGLADSQVRAFRHTSTLIAMRLMSAI
VAVSAVVYAQADTMQRRYQLEKSKNAAHRATERLEELQNAYSELMEQQEELRSLMNGIFK
GVFVHRYRDKVHEIRAVSMEEMGVWLRENPASFLNDGHLKYLGWMLHDKQATVRLQCVLS
LQKLYAEKSFIGRLELFTSRFKERLLNMVMDKDSDVGVEAVRLLLIIKQNTDDGLSEDEC
MRVYPLVFAVHKGLASAAGEFLYHVLCAEVDHVLEKEEKERRNVTFLNLLTCFFIQSKYH
EHAAYLVDSLWGVAVSELRDWETMTSLLLQENGDEQGLNDDEEAALIELMMCAVRQATEG
TPPTARSLGRKNLKGRKQQILERKRITNHFIPLLPQLLTKFSADVDKVICLLKAPLYFDL
EVYGSTGRLEKYLEQLLFQVCEIVEKHHEERVLDACVRVLSVLCFDQYTFSARAERVVSQ
LFDSTVERFNTHLADVLQGTADEEDVYSAATSLKKLAIFSSARDLTALKLFEPCFLLLKT
GIESREVDVELMLSALKCAVFHLLWARAKISQTPQPEKAEVKHLLKQVRSFCEVCQSCLS
MSNSLVRNKAFECVCDVLVVFGPGKSSSTDAQSVCVSPDDTLRAEMASFLIDYIFSDPED
EGADEDEELKIIALQCRRNQLAGYCKLIIYGALELRAAADVFKHYSKFYRDFGDIIKETL
SKSKIMSPVESARTICLSLQQLYSSLGDEGHDDMKDIRDVAKKMAMSFGVNLQHIRKPLI
ALHQDGISFALREVDESDYPNLSFLEVLTEFSHKLMKQDRAQLLNYLHSVSESVRVSGNT
ACVDMYERSLRTGSRETPAVSPPHTPAKRRRTTESSVGSGLDAPALTSTVIQSRVGHGHQ
QTQPPSTEVSSDQLSEDDFIEGSIDRKLQQGRRDQDSSEPSDVHSQLHMLSLIEEDFDEE
EPDIEDYDEDSDGVGVVSLPSTRHSTSFLEDLFE
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggcagattctgacctggaaagtttgagtcctgtggagtcagatgatctttca
ggatcagatgaagactttgaacccaacatgagaaaaacaaagaggaaaaagggaccagct
ccaggagacacagtgacactttctaaacggcccagacgaacagcaggcagcacttccagt
ccttcgcttacaccctcacctggagcttctcgcacaacaaaacacacacctgccccacag
cccgagacagatagggccgaaagaaggaagactgggaacatgtttgtggctgtgagatca
ggacgctccgcactggtgacggtgattgatgaatggctggatgactataaacaggataga
aaagagggtcttcgagaactcttgaattttgtggttgagtgttgtggctgtaaaggctcc
gtaacaagggcgatgtttgatagtatgcagaatgctgacatcatcagtcacctgactaaa
gagtttaatgaggactcagtaagttaccctttggctgccggggggtctcagggtcgacgg
tttcgtgatggactgtgcgagtgggtgtgtcaacttgtgcagcgctgcagacacagtctg
ctctatgatgaatttttattctcttccctgattgccttcctcacggggctcgctgattcg
caggtccgagcctttcgacacaccagcacgctcattgccatgcgtctgatgtctgctata
gtggcggtgtctgcagtggtgtatgctcaggctgacacaatgcaaagacgctatcagctg
gagaaaagcaagaatgctgcacacagagcaactgagagactggaagagctccagaatgcc
tacagcgagctgatggagcagcaggaggagttgcgctctttgatgaacgggatcttcaaa
ggagtgtttgttcatcggtatagagacaaagttcatgagatccgtgcggtctctatggag
gagatgggggtgtggcttagagaaaaccccgcctccttccttaacgatggacacctcaaa
tacttaggctggatgctacatgacaaacaagctactgttcgtttgcagtgtgtgttgtct
cttcagaaactttatgcggagaaaagttttattggccgtttggagctctttactagtcgc
tttaaggagaggttgttgaacatggtaatggataaagactctgatgttggtgtggaggca
gtgaggctgctgctgatcattaagcagaacacagacgatggtttgtctgaggacgagtgt
atgcgtgtgtatccactggtgtttgctgtacataaaggacttgcgtctgccgctggagag
tttttgtaccatgtgctgtgtgctgaggtggatcatgtacttgaaaaagaagagaaagag
aggcgcaatgtcacttttctcaacctgctcacatgtttctttattcagagcaagtatcat
gaacatgctgcgtacctggtggacagcctctggggtgtggctgtgtctgagcttagagac
tgggagacaatgacatcgctgctgctccaggagaatggagatgagcaagggctgaatgat
gatgaagaggctgctctaattgagctgatgatgtgtgcagtcagacaggcaacagaggga
actccacctacagctcggtccctcgggaggaagaatttaaaaggcagaaagcaacagatt
ttggaaaggaaacgcatcaccaatcatttcataccactgctgccacagttactcactaag
ttctctgcagatgtggataaagtaatttgtttgctcaaagctcctctgtattttgatctt
gaagtttacggcagcacagggcggctggagaagtatttggagcagttgttatttcaggtg
tgtgagattgtggagaagcatcatgaggagcgtgtgctggatgcgtgtgtgcgtgtgttg
tcggtgttgtgctttgatcagtacactttctctgcgcgtgccgaaagagtcgtgagtcag
ctttttgactcaaccgtggagagatttaacacgcaccttgccgatgtactgcagggcaca
gctgacgaggaagacgtgtacagtgccgcaacttccctgaagaaattggccattttcagc
agtgcaagagacctgactgcgctgaagctgtttgagccttgcttcctgctgttgaagact
gggatagagtccagagaggtggatgtggagttaatgttgtctgcactgaagtgtgctgtt
ttccatttgctgtgggcgagggcgaagatctcacaaactcctcaacctgagaaggcagag
gtgaaacatttgctgaagcaggttcggtcattttgtgaggtgtgccagagctgcctttct
atgagcaacagtcttgtcaggaacaaggcctttgaatgtgtgtgtgatgtattggtggtg
tttggaccaggcaaaagcagcagtactgatgctcagagtgtgtgtgtttctcctgatgac
acactcagggctgagatggcctccttcctgattgattacattttctctgatcctgaggat
gagggcgcagatgaggatgaggagttgaaaatcattgctcttcagtgcagaagaaatcag
ctggccggttactgcaaacttattatttacggagctttggagctcagggcagcggctgat
gtttttaaacactacagcaagttctacagagattttggtgatataattaaggagactctg
agtaaatctaagattatgagcccagtggaaagcgcaaggacgatctgcctcagcctacag
cagctgtattcctcattaggtgatgagggtcatgatgatatgaaagacatcagagatgtg
gcaaagaaaatggcaatgagctttggtgttaatctccagcacatccggaaacctctcatc
gctctacaccaggatggtattagttttgcgttaagagaagttgatgagagcgattatccg
aacttgagctttctggaagtcctcactgaattcagccacaaactcatgaagcaggaccgg
gcacagctattgaattatctacacagtgtgtctgagagtgtgcgtgtgagtggaaacaca
gcatgtgtggacatgtatgagcgctcactccgtactggatccagagagacacctgctgtc
tctccaccacacacaccagccaagagacgcagaaccactgagagttcggtcggtagcggt
ttggacgctccagcgctaacctctacggttatacagagtcgagttggccatgggcaccaa
cagactcagccaccatctacagaagtcagctcagatcagctatcagaggatgactttata
gaggggagtatagatagaaagctgcagcaaggcaggagggatcaggatagctctgaaccc
agtgatgtgcactctcagctccacatgctctctctgattgaggaagactttgatgaagag
gaacctgatatagaagactatgatgaagactcggatggggttggtgttgtatctctgcca
tcaacacgccattccaccagtttcttagaagacctgtttgagtga
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