KEGG   Clarias gariepinus (North African catfish): 128545115
Entry
128545115         CDS       T10780                                 
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    128545115 (tbl3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cgar03009]
    128545115 (tbl3)
Ribosome biogenesis [BR:cgar03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    128545115 (tbl3)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Utp13 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_HPS5 DUF3246
Other DBs
NCBI-GeneID: 128545115
NCBI-ProteinID: XP_053371461
LinkDB
Position
16:complement(14637066..14658522)
AA seq 920 aa
MAANTLRFKTNYAVSSKIEPFYKGGKVQISRDENHIFCTSGPRVNILQISTGKILHSIEQ
DDQEDITSFSLSPDDEILVTASRALLLKQWDWKEEKCTRTWRAIHNVPVASMAFDCTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVQFHPDITLLQLFSSSMECGIRIWDLR
TSKCICILESHFSAVTSLAFSLDGFTLISSGRDKICTVWDLKERKVKRTVPVYEAVEGVV
ILPENEDYSKLGVKSKELHFVTAGSKGVLRVWESSSARCVFTQTLPNAAGSQSEEEDGDP
LSLVYCMFLPLCNRLATVTAEHNILFYQLPSLTVQHQFVGYNDDVLDVRFLGKQDSHIVV
ATNSSQLKVFELATNSCQILYGHTDTVLSLDVFKKRCMFASCAKDNSVRVWKMDLATGHV
ECVAQGHGHSNAVGSISCSRLKKAFLVSGSQDCTIKIWDLPDNLPGPGVEPVQLTARVTE
KAHDKDVNSVAVSPNDKLLASGSQDRTAKLWSLADMSLLGVLRGHRRGIWCVQFSPVDQV
LASASADGTIKLWGLHDFSCLKTFEGHDASVLKIIFVSRGTQIVSGGSDGLVKLWTIKTN
ECVKTFDAHQDKVWALHGNSSDDLIVTGSADSNITVWKDVTEEELAEEQAKQEGQILKQQ
ELSNLLHEKNFLKALGIAISLDQPHTVLRVIKEIQQEEEAEQHLEKTILRLRQDQKESLL
RYCVVWNTNARSCLSSQAVLQVLLTHLSPDELLQFQGARTHLEGLIPYTERHMQRISRLL
QASMFLDYMWQKMRVTGSKDSGEMQGEEMNTEPQNIIVLDKNPGREKPSGQQENSEHSDD
MEDADSSEEDSENDDSDSVIALKGFRSRNKRVNSVKNRGHPSNVESSDDDDDEEEEEAEI
STVGPNKAAMLTSCIATTVS
NT seq 2763 nt   +upstreamnt  +downstreamnt
atggcagccaacacgctgcggtttaaaacaaactatgctgtctccagtaaaatcgagcca
ttctacaagggagggaaagtacagataagccgtgatgaaaatcacatcttttgcacctct
ggaccacgagtcaacattttgcagatttctactggcaaaattctccacagtattgaacag
gatgatcaagaggacatcacctcgttctcactcagccctgatgatgagatactggtgact
gccagcagggctctactgttgaagcaatgggactggaaggaagagaagtgtactcgcacg
tggagggcgattcacaacgtgcctgtggctagcatggcattcgactgcacctccactctt
ctggcaactgggggttgtgatggcactataaagctgtgggatgtcgtcaaacagtactgc
acgcacaatctaaaaggctcttctggcgttgttcatttggtgcagtttcatccagatatc
accctgctgcagctcttctcgtcctctatggagtgtggaatccgtatttgggacctgcgc
accagcaagtgcatctgcatcctggagagccacttcagcgcggtcacgtcacttgccttt
tctctcgatggcttcactttaattagctctggtcgagacaaaatctgcacagtgtgggac
cttaaagagaggaaagtaaagagaaccgttcctgtgtatgaggctgtggagggtgtagtc
attctgccagaaaacgaggattactcaaagcttggcgtgaaaagcaaagaactacacttt
gtcactgctggcagtaaaggtgtgctgagggtctgggagtcgagctcagcacggtgtgtg
ttcacacagacgctaccgaacgctgcaggctcccagtcagaggaagaggacggggatcct
ctgagcttagtgtactgcatgtttctgcctctttgcaaccgcctggctacagtcacagcc
gagcacaacatcctgttctaccagctgccctctctcactgtgcagcaccagtttgtgggc
tataacgatgacgttctggatgtcaggtttctgggaaaacaggacagtcacatagttgtg
gccacaaacagctcacaactcaaggtgttcgagctggccaccaacagctgccagattctt
tacggtcacacagacactgtcctctccctggatgtgtttaaaaagcgttgcatgtttgca
agctgtgccaaggataactctgtgcgggtgtggaagatggacctcgcgaccggtcatgta
gagtgtgtggctcagggccatggccactccaacgctgtgggctccatttcgtgctccagg
ttaaagaaggccttcctggtgtctggaagtcaggactgcactatcaaaatatgggatctg
cctgataatcttcctggtccgggtgtcgagccggtccagcttactgctcgagtcactgag
aaggcccatgataaagatgtaaacagcgtggctgtctcacccaatgacaagctgctagct
tctggttctcaagaccgcacagccaagctctggtccctggccgacatgagcctgctcggg
gtactccgcggtcatcgccgaggcatctggtgtgtacagttttctcctgtggaccaagtg
ctggccagtgcatcagctgatggcacaatcaagctctggggccttcatgactttagctgt
ctcaagacgtttgaaggacacgatgcctctgtcctgaagataatatttgtcagccgaggc
actcagatagtttctggtggttccgatggtcttgtgaagctctggactattaaaaccaat
gagtgtgtgaagacctttgatgctcaccaggataaagtgtgggctctgcacggcaacagc
agcgatgatctgattgtgaccggatccgctgactctaacatcacagtttggaaggatgtc
acagaggaagaactagcagaggagcaggcgaagcaagagggtcagattctcaagcaacag
gagttatctaatctgcttcatgagaagaactttttaaaggctctgggcatagccatctcg
ctggatcagcctcatactgtgcttcgagtcatcaaagaaatccagcaagaggaggaggct
gagcagcatctggagaaaaccatccttagactacggcaggaccaaaaggagtctctgctg
cgatactgcgtggtgtggaacacaaatgcacgaagctgtctgagctcccaggcagtgtta
caggtgctactgactcacctgagcccagacgagctgctgcagttccaaggagcgcgcact
catctagagggtcttatcccctatactgagagacacatgcaaaggatcagccgtctgctc
caggcctccatgttcctggattacatgtggcagaagatgcgagtgacaggaagtaaagac
agtggggaaatgcagggagaagagatgaacaccgagccacagaacataattgtacttgac
aagaatccagggcgggaaaaaccgagtggacagcaggagaattctgaacacagtgatgac
atggaggacgcagacagcagtgaagaagactcggagaatgacgacagtgacagtgtcatc
gcattgaagggttttagatccagaaacaagagggtaaacagtgtaaaaaacagaggtcat
ccatccaatgttgagagctctgatgatgatgatgatgaggaggaggaggaggcggaaatt
tccacggttggtcccaacaaggctgcaatgctaacttcgtgcattgcaaccactgtgagc
tga

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