Clarias gariepinus (North African catfish): 128545299
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Entry
128545299 CDS
T10780
Name
(RefSeq) trace amine-associated receptor 13c-like
KO
K05051
trace amine associated receptor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128545299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128545299
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Biogenic amine
Trace amine
128545299
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GFIT
Motif
Pfam:
7tm_1
DUF5989
S_4TM
Motif
Other DBs
NCBI-GeneID:
128545299
NCBI-ProteinID:
XP_053371480
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All DBs
Position
2:49815556..49816548
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AA seq
330 aa
AA seq
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MNLTELNQSDRCEHFSCPERTLSPEVYILLYVCSTAVILLTVCGNLLVIISVLHFKQLHT
PTNTLVLSLAVSDLLIGAFVMLPTFIWTIESCWIFDISYCIFLMIISFFLGSQSIYNIAL
ISVDRYLALSNPFFYTNTITRRKLSTVVYSNWFLCLGYAMALLYFNSHLMKFGMCPGECF
YFLNEVWTVIDLVYSFIVPLSVIIILYTLIFVIAKKHATAIRELNNHTRSNTQKINSHPM
KSERKAAKVLGILVSVFLVCLLPYFIYSLLGGVTELQLDTIHKLLIMFCLNSTINPFIYA
LFYPWFRRCIKLIISLHIFKTDSALINILS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgacagagcttaaccagtctgatcgctgtgagcatttctcctgtccagagaga
actttatctcctgaagtttatattctactgtatgtgtgttcaactgctgtgattcttcta
acagtgtgtggaaatctgcttgtcatcatctctgttcttcacttcaagcaacttcacaca
ccaaccaatacacttgtgctgtctcttgctgtgtcagatttactcatcggtgcttttgtg
atgctaccaacgtttatctggacaattgaatcatgctggatttttgatataagttattgc
atctttttaatgatcatttctttttttcttgggagccagtccatatataatattgctttg
atctctgtggatcggtatttggctctctcaaacccatttttctacacaaacacaatcact
aggaggaaattaagcacagtggtttattctaattggtttttgtgtctagggtatgccatg
gcacttttgtattttaatagtcacttaatgaagtttggcatgtgtcctggagagtgtttt
tactttctaaatgaagtttggacagtaattgatcttgtatattcatttattgttccactt
tctgtcataatcatattgtatactctgatttttgtaattgctaagaaacatgccactgct
atcagagagctcaataatcacacacggtctaatacacagaaaatcaactcgcatccgatg
aaatctgagagaaaagcagcaaaagtcctcggaattttagtgtctgtgtttctggtgtgt
ttacttccatattttatttatagtttgctaggtggtgttactgaactacagttggataca
attcataaacttttaattatgttttgtcttaactccactattaatccatttatttatgcc
ctgttttatccctggtttagaaggtgcattaaactgattatatctttgcatatatttaaa
acagactctgcattaatcaatattctttcatga
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