Clarias gariepinus (North African catfish): 128545397
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Entry
128545397 CDS
T10780
Name
(RefSeq) WD repeat-containing protein 70
KO
K24752
WD repeat-containing protein 70
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128545397
03036 Chromosome and associated proteins [BR:
cgar03036
]
128545397
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128545397
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128545397
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
128545397
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
128545397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
DSE1_N
CFAP251_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
PEP5_VPS11_N
Ge1_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
128545397
NCBI-ProteinID:
XP_053371602
LinkDB
All DBs
Position
17
Genome browser
AA seq
644 aa
AA seq
DB search
MAAQRDSDEKKGDEEDISSVMGFSGFGRKARTFDLEAIFEQTRRTAIERSQRVLEDRQQL
ESQISGPSAASSAASASSQKQRASASTSRQKESDDSSDSSDSEPIGPPAPPSQADDDDEP
IGPPVPPGFSRTAAAAAADDDEEDDDTMEEDEDDDPVKKIPDTHEITLQHGTKTVSAMGL
DPSGARLVTGSYDFDVKFWDFAGMDAALQAFRSLQPCECHQIKSLQYSITGDVILVVAGN
SQAKVLDRDGFQVLECIKGDQYIVDMANTKGHTAMLNSGCWHPKIKEEFLTCSNDGTVRT
WDLNNEKKHKSVFKPRSMQGKRVTPTCCTYSRDGKLIAAGCQDGTIQIWDRNLSVHTKFH
CRQAHAVGSDTSCLTFSYDGTTLASRGGDDTLKTWDIRNFKKPLNVATGLSSFFPMTDCC
FSPDDKLLVTGTSVKRDQGNGKLVFFDRESFKKVYEIEVASASVVRCLWHPKLNQIMVGT
GNGLAKVYYDPVKSQRGAKLCVVKSKRKEKQAETLTQDYIITPHALPMFREARQRSTKKQ
LEKDRLDPMKSHKPEPPVSGPGRGGRVAAHGGTLSSFIVKNIALDKTDDSNPREAILRHA
KEAAENPFWVAPAYKRTQPNPLFAEEESEDEEDDKEPEWKKRKI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagagagacagtgatgaaaagaaaggcgatgaagaggacatatcctcagtt
atgggcttctctggctttggtagaaaagctcggacgttcgacttggaggctatttttgaa
cagactcggaggacagccatcgaaaggagccaacgagtattagaagaccgtcagcagctg
gagtctcagatatccggccccagtgctgcttcctccgcggcgtctgcctccagtcagaaa
caaagagcgtctgcttccacttctagacagaaggagagtgacgacagcagtgacagcagc
gactctgagcccattggtcctccagctcctccttcacaagctgacgacgacgatgagccg
atcggaccgccggtcccaccaggcttcagccgcactgctgccgccgccgccgccgatgat
gatgaagaagacgacgacacaatggaggaggacgaagatgatgacccagtaaagaagatt
ccagacactcatgagatcacgcttcagcatggtacaaagacggtctcagctatgggtctc
gacccctccggcgctcgactggtcaccggcagctatgattttgatgtcaagttctgggac
tttgccgggatggatgcagcactacaggccttcaggtccctacagccttgtgaatgtcac
caaatcaaatccttacagtatagtataaccggtgatgtgatcctggtggtggcgggaaac
tcccaggctaaagtcctggatcgggacggcttccaagtcttagagtgcatcaaaggggac
cagtatattgtggacatggccaataccaagggtcacacggccatgctgaacagcggctgc
tggcaccccaagatcaaagaagagttcctcacctgctccaacgacgggacggtgcggacc
tgggacctgaacaatgaaaagaagcacaagtccgtattcaagcctcgatcgatgcagggc
aagagggtcacccccacctgctgcacgtacagccgagacggcaagctgatcgccgccggc
tgccaggacggtaccatccagatctgggacagaaacttaagcgtccataccaagttccac
tgccggcaagcccatgctgttggttcggacacctcctgcctcaccttctcctacgacgga
accacgctcgcttcacgaggaggggatgacactttaaagacatgggacatccgcaacttc
aagaagcctctcaacgttgccacggggttgtcctcgttcttcccgatgacagactgctgc
ttcagtcctgatgataaactcctggtgacggggacctcagtgaagcgtgaccaaggcaac
ggcaaactggtcttctttgacagagaatcctttaagaaagtatacgagatcgaggtggct
agcgcgagtgttgttcgctgtctctggcatccgaagctgaaccagatcatggtcgggacg
gggaacggcctagccaaagtctactacgacccagtcaagagccagaggggtgccaaactt
tgcgtggtgaagagcaagaggaaagagaagcaggccgagacgctgacgcaggattacatc
atcacaccccacgcattgccaatgttccgcgaggccagacagcgtagcactaagaagcag
ctggaaaaagacaggctcgaccctatgaagtcccacaagcccgagccgcccgtgtccggc
ccaggcagagggggtcgcgtggccgcccacggaggcaccctgtcgtccttcatcgtcaag
aacatcgctctggacaagaccgatgacagcaacccccgcgaggccatcctgcgccacgcc
aaagaggcggccgagaaccccttctgggtcgctcccgcgtacaaaaggactcagccgaat
cccttgtttgctgaggaagaatctgaggatgaagaagacgacaaggagccggagtggaag
aaacgcaagatctga
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