KEGG   Clarias gariepinus (North African catfish): 128545454
Entry
128545454         CDS       T10780                                 
Symbol
il1b
Name
(RefSeq) interleukin-1 beta
  KO
K04519  interleukin 1 beta
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04010  MAPK signaling pathway
cgar04060  Cytokine-cytokine receptor interaction
cgar04217  Necroptosis
cgar04620  Toll-like receptor signaling pathway
cgar04621  NOD-like receptor signaling pathway
cgar04623  Cytosolic DNA-sensing pathway
cgar04625  C-type lectin receptor signaling pathway
cgar05132  Salmonella infection
cgar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128545454 (il1b)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    128545454 (il1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    128545454 (il1b)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128545454 (il1b)
   04621 NOD-like receptor signaling pathway
    128545454 (il1b)
   04623 Cytosolic DNA-sensing pathway
    128545454 (il1b)
   04625 C-type lectin receptor signaling pathway
    128545454 (il1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128545454 (il1b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128545454 (il1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cgar04052]
    128545454 (il1b)
   00536 Glycosaminoglycan binding proteins [BR:cgar00536]
    128545454 (il1b)
Cytokines and neuropeptides [BR:cgar04052]
 Cytokines
  Interleukins
   128545454 (il1b)
Glycosaminoglycan binding proteins [BR:cgar00536]
 Heparan sulfate / Heparin
  Cytokines
   128545454 (il1b)
SSDB
Motif
Pfam: IL1
Other DBs
NCBI-GeneID: 128545454
NCBI-ProteinID: XP_053371697
LinkDB
Position
17:9563768..9566294
AA seq 292 aa
MACKDLLNLKSHIEIDSGVDSDDMGFDEMDCSDSLAMSGSCDLHKGLRIEITKEVLGMRS
IINVVIALQRLKHTERVQSTEFTGQEFNIAETKVKDLNCSESKSYSRQDKVVQCTICDKS
KKALVQMGPFLLAVTLKGGNEKTWFNLSAYNPPTCRDNTKGQAVCLGIVKSDFFLSCTLD
NGTPSLVIEEVKDKKSLKAIRENDGMERFLFLRNSSGDTLNTFESVQYPGWFITTSKDEF
QPVQMSQQQTSHLQLFTLNDEKEVPQIESHSEKTVFRVCTEYKCLSGDSFYV
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcctgcaaagatttgttaaatctgaaaagccacattgaaattgacagtggagttgat
tctgatgacatgggctttgatgagatggactgctctgattctttggccatgagtggcagt
tgtgacctgcacaagggactccgtatcgaaatcaccaaggaggttctgggtatgcgctcc
attattaacgttgtaatcgctctgcagaggctgaagcacactgaaagagttcagtccaca
gagttcactggccaggagttcaatattgcagagacaaaggtgaaagatttgaactgcagt
gaatccaagagctacagcaggcaggataaggttgtgcagtgcactatatgtgacaagtct
aaaaaggccttggtgcagatggggccttttctgctggcagttaccctaaagggtggaaat
gagaaaacatggttcaacctctcagcctacaatccaccaacctgcagggacaacacaaaa
ggccaggctgtatgtttggggattgtaaagagcgacttctttctttcatgcactttggat
aatggcactccttctctggtgatagaggaggtaaaagacaaaaagagtctgaaggcgatc
agggagaatgatggcatggaacgctttctgttcttgaggaacagctctggtgacaccctt
aacacctttgagtcggtccaatacccaggctggttcatcaccacctccaaggatgagttt
cagcctgtccaaatgtctcagcagcaaacgagtcacctccagctgttcacactgaatgat
gagaaagaagtccctcagatagaatctcattcagaaaaaacagttttcagagtatgtact
gagtacaaatgtttatctggagactcattttatgtttaa

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