Clarias gariepinus (North African catfish): 128545470
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Entry
128545470 CDS
T10780
Symbol
ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128545470 (ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128545470 (ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128545470 (ykt6)
Membrane trafficking [BR:
cgar04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
128545470 (ykt6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
128545470
NCBI-ProteinID:
XP_053371715
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All DBs
Position
17:complement(7952542..7965938)
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AA seq
198 aa
AA seq
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MKLYSLCVLYKGSNKANLLKAAYDLSSFSFFQRSSVQEFMTFTSNLIVERSSLGSRASVK
EQEYLCHVYVRNDCLSGVVIADNEYPSRVCFTLLDKVLDEFARQVNSIDWPSGSPATVQY
TALDSYLAKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagtttgtgtgtgttgtacaaagggtcgaacaaggccaaccttctcaaa
gcagcctatgatctgtcttcatttagtttttttcagagatccagcgtacaagagttcatg
accttcaccagcaacctgatagtcgagcgctcctcgttgggaagccgcgcatctgtcaaa
gaacaagaatacctgtgtcacgtatatgtgcgaaacgactgtctgagtggagtagtgatt
gcagataacgagtatccttccagagtgtgcttcactttgctcgataaggtgttggatgaa
ttcgctcggcaagtgaacagcatagactggccctcaggctcgccagctactgtccaatat
accgccttagacagctacctggccaagtatcagaacccgcgtgaagctgatgccatgaca
aaagtgcaagctgaactggatgaaaccaaaattattctccacaacacaatggagtccctt
cttgaaagaggagagaagctggatgacttggtacagaagtctgagcacctcggaaaccag
tcaaaagccttttacaaaacggcacggaagcagaactcttgctgcgaggtgatgtga
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