Clarias gariepinus (North African catfish): 128545493
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Entry
128545493 CDS
T10780
Symbol
vamp2
Name
(RefSeq) vesicle-associated membrane protein 2
KO
K13504
vesicle-associated membrane protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128545493 (vamp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128545493 (vamp2)
Membrane trafficking [BR:
cgar04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
128545493 (vamp2)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128545493 (vamp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Orf78
RIFIN
MCU
Fusion_gly
CD34_antigen
ODV-E18
PRIMA1
Motif
Other DBs
NCBI-GeneID:
128545493
NCBI-ProteinID:
XP_053371781
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All DBs
Position
17:1107446..1114424
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AA seq
110 aa
AA seq
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MSAPGPAGAPEGGNQPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDR
ADALQAGASQFETSAAKLKNKYWWKNAKMMIILGVICVIVLIVIIVYFST
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccaggcccagccggcgcccccgaaggagggaatcaaccacctcccaacctg
accagcaaccgccgcctacagcagacgcaggctcaggtggacgaggtggtggacatcatg
cgtgtgaacgtggataaggttctggagagggaccagaagctctcagagctggacgaccga
gccgacgcgctgcaggccggagcctctcagttcgagaccagcgccgccaaactcaagaat
aaatactggtggaagaacgccaagatgatgataatcctgggtgtgatatgtgtgatcgtg
ctcatcgtcatcatcgtttacttcagcacctaa
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