Clarias gariepinus (North African catfish): 128545500
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Entry
128545500 CDS
T10780
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128545500 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128545500 (grin3a)
04082 Neuroactive ligand signaling
128545500 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128545500 (grin3a)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128545500 (grin3a)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
128545500
NCBI-ProteinID:
XP_053371787
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Position
17:complement(21798304..21818781)
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AA seq
1113 aa
AA seq
DB search
MPDPGRLVLLLLLAPGALVLVLTPACLLAHPQPCQILKRIGHTVRVGAVHLQPRAAVTHS
SIRKKELEIGDWDWDRETAREELEVVRKSLSVSEPGARPGRTNQQKGAKIKKPVESAFLP
RDSIFMAAETLNRLPNLLPFNLSLEIVMAVELGLGELPAFSFFSSSPPPVGSDPMSFLQS
VCHTVVVQGVSAIMAFPQNRDEFVKLEFVSSSLHIPVISVVQNEFRRKSRNSLHFQMAMK
NPQTPQADLIYSLLSINNWYDVSLLMCQELNISQFVFLLRNNSKFHLGSIVNISINSSSK
SDFQMSLQGHMTSVKDIMSTIVTFGCDIRDIKRIFVTIAKLGLVLPDYHWIIGDSQNVEV
LRTEGLPMGLMAHGRMRQPALDHYVQDSLEFIARAVGSAATVSPELALIPGITNCMMIED
RNLTSGKYLSRFMTNTSFDGLSGYIHVQDESTIISESHHFIWNLQHDPLGNPAWTRLGSW
KQGKVVLDYGVWPSKKRSHPGGDRRHSSRLHLRVVTLVEHPFVFTREVDVDGQCPAGQLC
LDPLTNETAVLDALFHDLQSGNSSVPTEIKKCCYGYCIDLLEKLAEDVGFNFDLYIVGDG
KYGAYKNGRWTGLVGDLLSGAAQLAVTSFSINSARSQVIDFTSPFFSTSLGILVRTRDTA
APIGAFMWPLHWSMWLGIFASLHVTAVFLTLYEWKSPFGMTPKGRNRERVFSFSSALNVC
YAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTYEQLSGIHDP
KLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEYMRRYNVPTTPDGIDHLKNDPQKLDAFI
MDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLKQNSPLTSNISELVSQYKSDGFMDML
HDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCVGVALSLLTTIAEHVVHRWVIPKM
QNKPHYWLHTSQRLHRALNPTFNEDKLSTIAKPEKRCNIGSNQQNLWNICENSVCPNHHL
SNQEEQQNNLECLQCKELPPPPPPSPSPSQLNRQFPLQSNGKTDLLGLAHSPIVQELTDL
ETHIQIIKQQLQLAMKKKKELEQYQRTNMEPES
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgccggatccgggcaggttggtgctgctgctgttgctcgcgccgggcgctttggtgctc
gttttgacgcccgcgtgcctcctcgcgcacccgcagccatgccagatcctcaaacgcatc
gggcacacggtgcgcgtcggagccgtgcaccttcagcctcgcgccgccgtgacgcacagc
tccatcaggaagaaagagttggagattggggattgggattgggaccgagaaacggctcgg
gaagagctcgaggtagtcaggaaaagtctgagtgtgagtgaacctggcgcgagacctggc
aggactaaccaacaaaaaggcgcgaaaattaagaaacctgtagagagtgcgtttctgccc
agggactcgattttcatggctgcggagactctgaaccgattaccgaacctgttaccgttc
aacctgtccttggagatagtcatggctgtagagctgggactcggagagctgccggctttc
tccttcttctcctcttcacctccacctgtgggttccgaccccatgtcgttcctgcagagt
gtgtgccacaccgtcgtggttcagggagtttcagccatcatggcgtttccacaaaacaga
gacgaattcgtcaagttggagtttgtgtcctcttcactgcacatcccggttatcagcgtc
gtccagaacgagttcaggcgcaagagtcggaactcgctccatttccagatggccatgaag
aatccccagactcctcaggcagacttaatctactctcttctttccattaataattggtat
gacgtgagcctgttgatgtgccaggagctgaatatctcccagtttgtgtttttgcttcgc
aacaattccaaatttcacttgggttccatagtcaacatttccatcaacagcagcagcaaa
agtgactttcagatgtccttgcagggtcacatgacctccgtcaaggacataatgtccacc
attgtgacttttggatgtgatattcgggacataaagaggatctttgtaaccatagcgaag
cttggtttagtgctgccagactaccactggattataggggactcacagaacgtggaggtg
ttaaggaccgaggggctgccgatgggccttatggcgcacgggcgaatgaggcagccagct
ctggatcactatgtccaagattcattggagtttattgccagggccgttggatcagctgct
actgtttctccggagctggctctgatccctggtatcacaaactgcatgatgattgaggat
agaaatctcacctcaggaaaatatctgtcaaggttcatgaccaacacatcatttgatggg
ctaagtggctacattcatgttcaggatgagtctaccattatctccgaaagccaccacttt
atttggaatctgcagcacgaccccttggggaaccctgcatggacacgacttggcagctgg
aagcagggtaaagtggtacttgactatggagtttggcctagcaagaaacgttcacacccg
ggtggcgataggaggcattcatctaggttgcacctgcgagtagtgacactggtagagcac
ccatttgtattcacgcgggaggtggatgtcgatggtcagtgtccagcagggcagctctgc
cttgacccactcaccaacgaaacagcggttcttgatgccctctttcatgacttgcagtct
ggcaatagctctgttcccaccgaaatcaagaaatgctgctatggctactgtattgacctg
ctggagaagctggctgaggatgtgggttttaactttgacctctatattgtgggagatgga
aagtatggtgcctacaagaatggccgctggacaggcctggtgggtgacctgctgagtggt
gcagcgcagctggccgttacttcatttagcatcaactcagcacgaagtcaggttatcgac
ttcaccagccctttcttctcaaccagcctgggtatcttggtaaggacaagagatacggca
gcacccattggcgcctttatgtggcccttacactggagcatgtggctgggcatttttgca
tctctccatgttactgctgtgttccttaccctgtacgagtggaagagtccatttgggatg
acacccaaaggccgaaacagggaacgtgtcttttccttctcttcagcactcaatgtttgc
tatgctatcttgtttggcaggacagctgccatcaagccacccaagtgctggacaggccga
tttctaatgaacctctgggccatattttgtctgttttgtctctcaacatatacagccaac
ttggctgccgtgatggttggggaaaagacatatgagcagctttcaggtatacatgacccc
aagctccatcatccatcgcagggttttcgatttgggactgtacgcgagagtagtgctgag
gattacgtgaaaaaaagctttccagaaatgcatgaatacatgaggagatataatgttcct
acaacccctgatgggatagaccaccttaagaatgatcctcaaaaactagatgcttttatt
atggacaaagccctcttagactatgaagtgtccattgatgctgattgtaaaactctcaca
gtggggaaaccatttgcaattgaaggctatggcataggtctcaagcagaattcaccactc
acttcaaatatctctgagctggttagccagtacaagtcagatggatttatggacatgctg
catgataagtggtacaaagtggtgccctgtgggaagagaagttttgctgtgacagagact
ttacagatggggattaaacatttctcagggttatttgtaatgctgtgcgtaggagtcgct
ttgtctctcctcaccactattgctgaacacgttgttcatcgttgggtgatacccaagatg
cagaacaaaccgcattattggcttcatacaagtcaaagattgcatcgagcacttaacccg
accttcaatgaagacaaattatcaactattgcaaaaccagaaaaaaggtgcaacattgga
agcaaccagcaaaatctatggaacatctgtgaaaactcagtctgccctaatcaccacctt
tccaaccaagaggagcagcagaacaatctggagtgtttacagtgtaaagagcttcctcct
cctcctcctccttctccttccccatctcagctcaacagacagtttcctctgcagtcgaat
gggaaaacggacctgctgggcctggcacacagccccatagtgcaggagctgactgacctg
gagacacacatacagatcatcaagcagcagctgcagctggccatgaagaagaaaaaggag
ctggaacagtaccagagaaccaacatggaacccgagtcctag
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