Clarias gariepinus (North African catfish): 128545519
Help
Entry
128545519 CDS
T10780
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128545519 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128545519 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cgar02044
]
128545519 (sec31a)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128545519 (sec31a)
Secretion system [BR:
cgar02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
128545519 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
TPR_Sec16
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
128545519
NCBI-ProteinID:
XP_053371808
LinkDB
All DBs
Position
17:complement(21515591..21543964)
Genome browser
AA seq
1316 aa
AA seq
DB search
MKLKEINRTAIPAWSPAQHHPIYLAAGTSAQQLDATFSTTASLEIFELDLADPALAMKSC
GALSLPHRYHKLVWGPHGINDQGSASGVLIAGGETGDIILYDPSKIIAGDSEVIIAESNK
HIGPVRALDVNSFQTNLVVSGGNESEIYIWDLNSFSTPMTPGPKSQPAEDISCVAWNCQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLAWNPDVATQLVLASEDDRMPV
IQMWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
SSQWCFDIQWCPRNPAVLSAASFDGRISIYSIMGGNNDAVNSAQADQVSSSFANMDPFGT
GQTLPPLQLPQSTSANSTVTPLKKPPKWIRRPVGASFAFGGKLISLENIKPTPQQPQQPT
AHVVHVSQVVTDTDFLDRSNQLQATLTAGNFVEFCQGKIEAAQNEFEKTIWAFLKVHFED
DTRGKYLELLGYKKEELALKIASALERKEVKSDEGNEQPEIDTTLTNDLDGTPQTDFALP
VNGQPDSELDLSAVPLAEEQSDDGVVAANTSKEEPDLPEEVEENGDLTSEDALAAPVLAE
IPVVEEKPVHQIPSNVKFNQDVDGLITQALLVGDFEAAVNLCLHDDRMADAIILAIAGGP
ELLEKTQKKYLTKTQSKVGKIISAVVMRDWSNILETCELQNWKEALAAVMTYAKPEEFSS
LCGILGSRLEAAKDAALQAQACLCYICAGSVEQLVSCWSKAQDSSCPLALQDLVEKVVIL
RRAVEKTQGGVAPAVGTLWAEKMSQYANLLASQGSLQTAISYLPTNTEQAAVQQLRERLS
RALGQHGAAPVSNRHPAAAAAAPQPGYRPIPPQPQPQPLPSQLPPAASVPQYYPQVRAAC
TVTSWSNQTPTALPSAPHPLAPAKDPQPDPTQVAVPRFPVHAPDASNPYSHLQPYSSYPQ
VQQFTPGAGGPAIYDPLQNSSSTSAPLPPPPSSSAASFYPPHFMHPPSSQAAPPTFSRPP
FSPSQQAPTAPSLSSTSTSSFSPPPFSSGGSFRHGGPGSPTAMLPPPPTGASGTQAEPDM
IPASQRTGGITQDFWFLEGPQNGWNDPPALMRVTKKKKVPENYTPPAPITAPIMAPLGEP
QSPLPPQPTGVPGPFNLIQQQPPTAALMNPPTSSMPSMPIEGPPGAPTGDVIQPMQALPT
EKITKKPIPDEHLILKTTFEGLIQKCLAAATDPQTKRKLDDANKRLESLYDKLREQTLSP
AIVGGLHNMARSIESRAYTDSLNIHTHIVSNSNFSETSAFMPVLKVVLTQANKLGV
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaagagataaaccgcaccgccatcccggcttggagcccagctcagcaccac
ccgatttacttggctgcaggaacttctgctcagcagctcgatgctacgtttagcaccacc
gcctcactggaaatcttcgaactcgacctggctgatcctgctttggccatgaagtcatgt
ggtgctttgtccttaccgcacagataccacaagctggtttggggaccacatggcatcaat
gatcaaggctcggcctctggagtgctcatagctggaggagagaccggtgacatcattctc
tatgatccctccaagatcattgctggtgacagtgaagtcatcattgctgaaagtaataaa
catatagggcctgttcgagcgttagatgtcaactcattccagacaaacctggtagtgtct
ggaggtaacgagtcagaaatctacatctgggatttgaacagttttagtacgccaatgact
ccaggaccgaagtcacagcctgcggaggacattagctgcgtagcgtggaactgccaggtg
cagcacatccttgcctcagccagccccagcggcagagcctccatctgggaccttagaaaa
aatgatctcatcatcaaagtcagcgaccacagcaacaggatgcattgctctggtcttgca
tggaacccagatgttgccactcagctggttttagcctctgaagatgaccgaatgcctgtc
atccaaatgtgggatttgcgctttgccacctctcctcttaaagtcctagaaaaccacaca
aggggtgttctggccattgcttggagtttagctgaccctgagttgctattaagttgtggg
aaagataaccgaatcctatgttggaaccccaatactgctgaggtcctgtatgagctccca
agctcgcagtggtgttttgacatccagtggtgtccaaggaacccagctgttctgtctgct
gcctcctttgatgggcgcatcagcatctactcaatcatgggaggcaataatgacgctgtt
aacagtgctcaggctgatcaggtaagttcttcatttgccaacatggatccctttggcaca
ggccagacattgcctcctctgcagctgcctcaaagcaccagtgctaacagcaccgtcaca
ccgttgaagaaaccacccaaatggatccgtagaccagtgggggcttcatttgcttttggt
ggtaaactcatttctctggaaaacattaaaccaacaccacagcagccccagcagcccacg
gcccacgtcgtccatgtgagccaggttgtcaccgatacagattttttggatcgctcaaac
caactgcaggccactcttaccgctggaaactttgtggaattctgccagggaaagattgaa
gctgcacagaacgagtttgagaagactatttgggctttcttgaaggtccactttgaagat
gatacccggggtaaatacttggagctgctgggatacaagaaggaggaactagcactgaag
attgcttcagcattagaaagaaaagaagtcaaatcagatgaaggcaatgagcaacctgaa
atcgacacgacattgacgaatgacttagacggtacaccccagacagacttcgctcttcca
gttaacggtcagccagactctgagctggatctgagcgctgtaccattggccgaagagcag
tccgatgatggggtcgtggctgccaatacgagtaaagaggagccagacctgccggaggag
gtggaagagaatggagacctaacatcagaggatgcccttgcagccccggtgcttgcagaa
attccggttgttgaagagaaacctgttcatcagatcccttctaacgtcaaatttaaccaa
gatgtagatggattgatcacccaagctcttctcgttggggactttgaggctgctgttaac
ctttgtcttcatgacgaccgcatggcggatgcaatcatcctagccatcgctggtggacca
gagcttcttgaaaagacccagaagaaatacttaaccaaaactcaaagcaaagttggcaag
atcatcagtgctgtggttatgagggactggtcgaatatacttgagacgtgtgagcttcag
aactggaaggaggctctggctgcagttatgacctatgccaaacctgaagagttctcctct
ctttgtgggatactgggctccaggctggaggctgctaaagatgctgctctgcaagcacag
gcttgtctgtgttacatttgtgctgggagtgtagagcagctggtgtcttgctggtcgaaa
gcacaggattctagctgccctctcgcactccaggacttggtggaaaaagtggtgatactg
cggcgggctgtggagaagactcagggtggagtcgcccctgctgtaggcaccttatgggca
gaaaagatgagtcagtatgccaacctgctggcctcccaggggagcctgcaaaccgccatt
tcctacctgcccaccaacacggagcaggctgcagtgcaacaattgcgagagcgcctgagc
agagcactcggacagcacggagcagcacctgtatcgaacagacacccagcggctgctgct
gctgcgcctcaaccaggctacaggccgatcccacctcaacctcaacctcaaccactgcct
tctcagctccctcctgctgcttctgtaccacagtattacccgcaggttagggctgcctgt
actgtcacttcctggagtaaccaaaccccaaccgctctgcccagtgcccctcatccgcta
gccccagccaaagacccgcagcctgatccaacacaagtagctgtgccacggttccctgtg
catgccccggatgcctccaatccatactcacacttgcagccgtattcaagctacccccag
gtccagcagttcacaccaggtgctgggggtcctgcgatctatgacccgctccagaactcc
tcctctacatctgctcctcttcctcctccaccttcatcttctgctgcttctttctacccc
cctcattttatgcatcctccctcgtctcaggctgcaccacccaccttttccagacctcct
ttctctcccagccagcaagctccaactgctcctagtctgtcctccacctctacttcctcc
ttctcgcctcctcctttctcctcgggaggctcgttccggcacggcgggccaggctctcca
actgccatgctcccgcccccaccgaccggagcctcaggtactcaggctgaacccgacatg
atcccagcctcccaaagaacagggggaattacccaagatttctggtttttggaagggccc
caaaatggttggaatgatcctcctgctctcatgcgagtaaccaagaagaagaaggttcca
gaaaactacactcctcctgctccaatcacagcacccatcatggctccattgggcgagcca
cagtctcctcttcctccgcagccaacaggggttcctggtccatttaacctcatccagcaa
caaccacctactgctgcactcatgaacccgcccacatccagcatgcccagcatgcccatt
gaggggccacctggcgcacccaccggggatgtcatacagccaatgcaagcactccccact
gagaagatcaccaagaaacccatcccagatgagcacctcattctcaaaacaacatttgag
ggcctgatccagaagtgcttggctgctgccacagaccctcaaacaaagaggaagttggat
gatgctaacaagaggctagagtccctttatgacaaactgagagagcaaactctttcccca
gccatcgtgggcggcctgcacaacatggccaggagcatcgaatcccgcgcctacacggac
agcctcaacatccacacacacatcgtcagcaacagtaacttcagcgagacttctgctttt
atgccagtcttgaaggttgtgctaacacaggctaataagctgggtgtctga
DBGET
integrated database retrieval system
