Clarias gariepinus (North African catfish): 128545536
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Entry
128545536 CDS
T10780
Symbol
syk
Name
(RefSeq) tyrosine-protein kinase SYK isoform X1
KO
K05855
spleen tyrosine kinase [EC:
2.7.10.2
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04625
C-type lectin receptor signaling pathway
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128545536 (syk)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128545536 (syk)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgar01001
]
128545536 (syk)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
128545536 (syk)
Protein kinases [BR:
cgar01001
]
Non-receptor tyrosine kinases
SYK family
128545536 (syk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
SH2
DUF7145
DUF7063
ABC1
SH2_1
Kdo
Haspin_kinase
RIO1
Motif
Other DBs
NCBI-GeneID:
128545536
NCBI-ProteinID:
XP_053371872
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All DBs
Position
17:21222988..21252877
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AA seq
627 aa
AA seq
DB search
MADQVQGLSFFYGNITREEAEAYLRQGGMSNGLYLLRQSRNYLGGFALSVAYNHQSYHYT
IEREMNDTYAIAGGKSHRTPVDVVEYHAQESDGLVCLLKKPCNRPRGVEPKVGAFEDLKE
QLIRQYVQHTWKLKGASLEQALISQRPQLEKLIATTAHEKMPWFHGTISREDSEPRLLNN
RRTNGKFLIRQRDNNGSFALCLLHNGQVMHYRIDRDKAGKLSIPDGKKFDTLWQLVEHYS
YKPDGLLRSLTEACPRPEGPPALPGNHPELGGTSGILSRIRSASFPKPGLKKTTFKRCKE
KILDVCPGKITTYLRKSHETDNPYAQRETVPGTDDLPMSTEVYESPYADPEELRSTTVDR
KNLFLEDGELGSGNFGTVLRGIYHMRKTQKPVAVKILKNEDSNPAVKDEMLREAQVMQQL
DNPYIVRMIGICEAENLMLVMELAELGPLNKFLQRNRLVNKNVTELVHQVSMGMKYLEEH
NFVHRDLAARNVLLVTQHYAKISDFGLSKALTSEHDYYESKGHGKWPVKWYAPECMNFFK
FSCKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVIQMIESGQRMPAPPSCPQEIYNLMLKC
WTYKPDERPGFSVVEPRLRDYYYDISQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaggtccaaggcttgtcgtttttctatggcaacatcactcgagaggaagct
gaagcatacctgaggcaaggaggcatgagcaatggcctctacctgctccgccagagccgc
aactacctgggtggctttgccctgtctgtggcttacaaccatcagtcctaccactacacc
atcgaaagggagatgaatgatacatacgccatagcaggtggaaaatcgcaccgcactcca
gtggatgtagtggagtaccatgcacaggagtctgatggcctggtgtgtctactgaaaaag
ccctgtaatcggccccggggcgtcgagcccaaggtgggggcttttgaagatctgaaggag
cagctcatcaggcaatatgtacagcatacatggaaactgaagggtgcctcattggagcag
gctcttatcagtcagaggcctcagctggagaagctgattgccaccacggcacacgagaag
atgccctggtttcatgggaccatctcacgggaagactctgagccacgtttacttaacaac
cggcgcaccaatggcaaatttctaattcgacagcgagataacaacggctcctttgcgctc
tgtcttctccacaatggccaagtcatgcactatcgcatcgacagggacaaagctggcaaa
ctgtccattcctgatgggaaaaagtttgacacactttggcagctggtggagcattattcc
tataaacctgatggcctgcttcgaagcctgaccgaagcctgtccccgacctgaaggtcca
cctgcacttccaggaaatcatccagagctgggtggcacaagtggaattctctccagaatc
cgatctgcttccttccccaaacctggtctcaaaaagacaacgtttaagaggtgtaaagaa
aagatcttagatgtttgccctggtaagatcacaacataccttcgaaaaagtcacgagact
gataatccttatgctcagagggaaacagtgcctggaacagatgacttacccatgagcacg
gaggtgtatgagagtccatatgctgatcctgaagaactacgctcaaccacagtggaccgg
aagaacttgttcctggaggatggagagcttggctcgggcaattttggcacagttcttagg
ggtatctaccacatgaggaaaacacagaaaccggtggcagtaaagatcctgaagaatgaa
gacagcaatcctgcagtaaaggatgaaatgcttcgtgaggctcaagtcatgcagcagctg
gacaacccctacatagtgcgtatgatcggcatctgtgaagctgagaacctgatgctggtc
atggagttggctgagctcggccctctgaacaagttcctgcaaagaaacagacttgttaat
aaaaacgtcaccgagcttgtgcaccaggtctctatgggcatgaagtacctggaggagcat
aacttcgttcacagagatctagcagcccggaatgttctattagtcacccagcactatgcc
aaaatcagtgactttggtctgtccaaagccctcaccagtgagcatgattattatgagtcg
aaaggtcacggtaagtggcctgtgaagtggtatgcgcctgaatgcatgaacttcttcaag
ttctcctgtaagagtgacgtgtggagctttggcgtgctgatgtgggaagctttttcatac
ggccagaagccatacaaggggatgaagggaaatgaggttatccagatgattgagagtggt
cagaggatgcccgctccacccagctgcccacaagagatttacaacctcatgttgaaatgc
tggacatacaagccggacgagaggccaggcttttctgtggtggagcccaggctaagagat
tactactatgacatttctcagtga
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