Clarias gariepinus (North African catfish): 128545548
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Entry
128545548 CDS
T10780
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128545548 (sbno1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128545548 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128545548
NCBI-ProteinID:
XP_053371912
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All DBs
Position
17:8211863..8227692
Genome browser
AA seq
1431 aa
AA seq
DB search
MVRKQAKQRGNILQTAATLELPGNRLMMDPGQDLLLAALSESGICPNDLFDIDSQETAQS
PSSQQSVSKNVLDIGLGSEAAGIVGIEPAVPPTPTVTIRQKPQPSTTTFVLNQLNQLPSL
GTIVVTKPSVGPSSRQTITVTKVVQTSSPAQRSSSSPSATATVCSVVPPTREQIKLKDLL
RTSGVKTNSLGELMKLKPPPDIAQPVATATGTKIILLSTKLMNKPVEVNNGVKKEVSSKD
VARIWANEEIKMRSFSPVNLPGMKEEDEPEEEEEEELGHAETYAEYMPMKLKIGERHPDP
VVETSSLSSVSPPNVWYRLSVPEETIDRGWLSALQLEAITYASQQHETFLPNGDRAAYLI
GDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKF
KYGKISSKHNGSVKKGVIFATYSSLIGESQTGGKYKTRFKQLLHWCGDDFDGVIIFDECH
KAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTP
FKEFSNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFQGVTFKIEEVPLTNNYIKMYN
KSVRLWVSAREKFQQAANLMDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLARE
EVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFS
LLGIDLSAKKTPSPAETKEEQKGKKRKGGDVKKGAKKSRKSGGLSGSSSDESNSEDSDKD
DSDDSFNSVSSGDDEDDFNPFKDDSSEDEEDDPWLIRKDSKKSKEKKNKKKKKSIDPDSI
QSALLASGLGSTRPAFTTPIVKSTSNNSVVPAKSEPEENSCVTSNDAVEDAQQMKRELLE
QLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEIL
NLTEKQRFMDGEKNIAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGR
THRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNK
YGRNALEIVMKSIVNLDSPLVSPPSHFDGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDY
NNIGKFLNRILGMEVQQQNALFQYFSDTLNAVIQNAKKNGRYDMGILDLGSGDEKVKKID
AKKFLTPGYSTSGHVELYTVSVERGMSWEDATHIWAEQNGPDDGFYVQVRNNKKIAIMVK
EVNTKKRLFMVYRPNTGKQLKLETYVDIRKRCKKVLSDEAKQCWIDQYDSSADVCSHAYW
RGNCKKASVGLQCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGSNMKMQIVRLRTEDG
QRIVGLIIPANCVGPLTNILSSSDQSQQLAVQQQQMWQQLHPQSLSHSFNT
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggttagaaaacaagcgaagcaaaggggcaacatccttcaaaccgccgcgacactcgag
ctccctggaaatcgtctaatgatggatccaggacaagatttgcttctcgcagcccttagt
gaaagtggaatctgcccaaatgatctttttgacattgattctcaggaaactgctcagtcc
ccttcctctcaacagtcagtttcaaagaatgtccttgacattggtctcggcagcgaagca
gctggaattgttggaattgaacctgctgtgccacccactcctacagtcacaatcagacag
aagcctcagccctcaaccaccacattcgtcttaaatcaactaaatcaactgccatcgctg
ggaaccatcgtagtcacaaagccctcagtgggcccttcttcaagacagaccatcacagta
accaaggtggtgcagacgtcatcgccagctcagagaagctcttcctcgccatctgctaca
gctaccgtgtgcagtgtggtcccaccgactcgagagcagatcaagctaaaggacctgctc
cggaccagcggcgtgaaaacaaacagccttggtgaacttatgaagctgaagcctccacct
gatattgctcagcctgttgctacagctacaggaacgaagattattttgctctccacaaag
ttgatgaataaaccagtggaggtcaacaacggtgtgaaaaaggaggtgtcgagcaaagat
gttgccagaatctgggccaatgaagaaatcaaaatgcgcagcttttcgcctgtaaattta
cctggaatgaaggaggaggatgagccagaggaggaagaggaagaggagttgggacacgcc
gaaacatatgctgaatacatgccgatgaaattgaaaataggagagcggcatcctgatcct
gtggtagagaccagctccctctcgagtgtcagccctcctaatgtgtggtacaggctttct
gttccagaggaaacaatcgaccgtggctggctatctgctcttcagcttgaggccattacg
tatgctagtcagcaacatgagactttccttccaaatggagacagagcagcttacttgatt
ggtgatggtgctggtgtcggaaagggaagaactattgctggaatcatatatgaaaattac
cttctgggcagaaaacgatctctctggtttagcgtctcaaacgacttgaagtatgacgca
gagagggatttgagagatattggagcaaagaacatccaagtccattctttaaacaagttc
aagtatggaaaaatctcatcgaagcacaatggaagtgtgaaaaaaggtgtgatctttgct
acatactcatctctgattggagaaagccaaacaggtggaaaatacaagacaaggttcaag
cagttactgcattggtgtggtgatgattttgatggtgtgataatctttgatgaatgtcac
aaagccaaaaacgtctgtccaattgggtcatcaaaacccacaaagaccggactggctgtt
ctcgagctccagaacaagctgccaaaagcacgtgtggtctatgccagcgctacaggagcc
tctgagcctcggaacatggcttacatgaatcgtcttgggatctggggggaaggaacccct
ttcaaagaattttctaattttattcaggctgttgaaagaagaggtgttggtgccatggaa
attgttgccatggatatgaaattgagaggaatgtacattgctcgacagctgagcttccag
ggtgtgacatttaagattgaggaagtccctctgacaaacaactacatcaaaatgtataac
aagtcagtccgtctgtgggtgagcgcacgagagaaattccaacaagcagctaacttgatg
gacgctgaacagcgcatgaagaagtcaatgtggggacagttctggtccgcacaccagaga
ttctttaagtacctgtgcattgcttcaaaggtgcgcagagtggtgcagctagcccgagag
gaagtcaagaatggaaagtgcgttgttattgggctgcagtcaacaggtgaagctcgaaca
cttgaggccttggaggaaggtggaggcgagctcaatgacttcgtctctactgcaaagggt
gtcctgcagtcactggtggagaagcacttccctgctccagacagacagaagctcttcagc
ctactgggtattgatctatcggcaaagaaaaccccatcaccagcagaaactaaggaggag
cagaagggcaagaaaaggaaaggtggagatgttaaaaaaggagcaaagaagtcccgtaaa
tccggagggctttcaggcagcagctcagatgagagcaattcagaagactctgacaaagat
gacagcgacgacagctttaactcggtcagctcaggagatgacgaggatgacttcaacccc
ttcaaggatgattccagtgaggatgaagaagatgatccttggctaatccgtaaagactca
aaaaagagcaaggaaaagaagaacaagaagaagaagaaaagcatagacccagattccatt
caaagtgccttgttagcttctgggcttggttcaaccaggcctgctttcacaacacctatt
gtaaaatcaacgtccaacaactctgttgttcccgctaaaagtgaaccagaagaaaacagc
tgtgtgaccagtaatgatgcagtggaggatgcccagcaaatgaaaagggagctgttagaa
cagctagagaaactggctgaggatctgccaccaaacacacttgatgagcttattgatgag
ttgggaggccctgaaaatgtggcagagatgacgggacgcaaaggcagagtagtcagcaat
gacgacggcagcatctcgtatgaatcaagatcagaactggacgttcctgtagaaattctg
aaccttacggagaagcagcgattcatggatggagagaagaacattgctataatatctgag
gcagccagctctggtatttcacttcaagctgaccgtagagtgaagaaccagagaagaaga
gttcatatgactttagagttaccgtggagtgcagaccgagctattcagcagtttggtaga
acacacagatctaaccaggtaacggctcctgagtatgtgttcctgatatctgaacttgcc
ggagaacaaagatttgcctccattgttgccaaaagactagagagcttgggcgcgcttacg
cacggagaccgaagagccacagagactagggacctcagtcgattcaattttgacaacaag
tatggcagaaatgctcttgagattgttatgaagtccattgtcaatttggattctcccttg
gtctctccaccttctcatttcgatggggatttttttaaagaaatccgcaatgggttaatt
ggtgtggggttgataaatgtggaggataggtctggtgttctatcactggataaggactat
aacaacattggaaaattcttaaaccgtatccttggcatggaggtccagcagcagaatgcc
ctcttccagtatttctcggacactttaaatgctgtcattcagaacgctaaaaagaatggc
agatatgacatgggaattctggatttgggctctggggatgagaaggttaaaaagattgat
gcgaaaaaattcttgacgccaggttactccacctcaggccatgttgaactttatactgtc
agtgtagagagaggcatgtcatgggaggacgctacccatatttgggcagaacagaacgga
ccagacgacggcttctacgtgcaggtacggaataacaagaaaatagccatcatggtcaag
gaagtcaacactaaaaagagactgttcatggtgtaccgaccaaatactggaaaacagctc
aaactggagacgtatgtagatatacggaagcgatgcaaaaaggttctttcagatgaggca
aaacagtgttggattgatcagtacgactcttcagcggatgtttgctctcatgcttattgg
cgtgggaactgtaagaaggcatcagtgggactgcagtgtgaaataggactgcgttgccgg
acgtattatgtcctgtgtggctccgtcctcagcgtgtggaccaaagtagaaggtgtttta
gcctctgtaagtggaagcaacatgaagatgcagattgttcgtttgagaaccgaggacgga
caaagaatagtgggtctgatcattccagcaaactgcgtgggtccgcttaccaacatcttg
tcttcatcagaccaatcgcagcagctggctgtgcagcagcagcagatgtggcagcagctg
cacccacagagcctcagccactcgttcaacacatag
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