Clarias gariepinus (North African catfish): 128545553
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Entry
128545553 CDS
T10780
Symbol
wrn
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128545553 (wrn)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128545553 (wrn)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
128545553 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128545553
NCBI-ProteinID:
XP_053371926
LinkDB
All DBs
Position
17:19640514..19679132
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AA seq
1455 aa
AA seq
DB search
MDHTTPGDRSLPGWMTKEHHHDDDNDVQSRSQGIYKKNVIEDDLPYLEFGGRVIYSQEKN
DCSFLTEDLRSSLMPGSAVGFDLEWPPSFTKGKTKKVALVQLCASEEKCYLFHISSMSGF
PPGLKMFLEDESIKKVGVGVEGDKWKLLSDYEIKLKNFVELSDLANEKLRCVEKWSLDGL
VKHLFSKRLFKEKDVRCGQWDDFVLTEEQKRYAATDAYAGFIAYQKLERMEVNPGSLKLQ
ECLKQKLGQISRELEDIIRCVPEGLSCTSRAEKLVEDLSQQVASLKDFLTANHNIREERF
SNASADHNPKIQSAEISTMNPEPNQTCSKDRNGRFSSRDPVKHPSSLENDDVPTEQREYI
MSLDISEYELQMLEMQARQEENEEQSILAFEARSAMDDSAELSYECENDEELDSEMIQCA
EKMEKLNDSFEKQPNKAETIADDEDEVVEEDEAEGFDVNLPQPAPEQTKCLKMYFGHHSF
KPVQWKVIQSVLEQKRDNLVVMATGYGKSLCFQFPPVFCVNISVVISPLIALMEDQVMQL
QMSNIPACFLGSAQTHNLNDDLLTGHFRVVYMTPEFCSGNIPLLQQLNKSVGICLIAVDE
AHCISQWGHDFRSAYRDLGKLKRCLPHVPIVALTATASPSIRDDIVKSLHLVNPLVTCTS
FDRPNLYLDVNRKSGDVIQDLKSFLVKKKGGDYEFEGSAIIYCPSKKEAERVTSALYKLG
IRCGVYHAGLSIKRRKETQYQFMRDEIQCVVATIAFGMGINKPDIRKVIHYGAPKEMESY
YQEFGRAGRDGLPSSCHVLWTQSDMALNRFLLSQTRSERFRGYKMEMMAKMEKYLNSTKC
RRKLILSHFEDKQLRKVTSGILGTSKCCDNCKSGSVKSQSQDCSEQDFQEFGVYAFQLMG
AVKAMGEKFGITAPVLLLRGSTAQRVPERFRQDALFGTGKGMSEAWWRALGRELISEKYL
MEASGYNKFSTLCKLTPKGRTWLSKAQDEKHRTLLLQPNRDLCPRVYVPKKQQFSNSVVV
GVRDQALPSTSQRTNFRSQVDSSAVIKNDRVAHYRSVPGSPLAPKAMPQPPAVSPREMEL
QAELYSKLVAERQKLASMKDIPPAILATNKILLDLAKLRPCSVAKLKQVDGVSEAKAAML
APLLQTITDFCETHSLQEAVTCSSSTSCDEQAHRSQTGKPPAQSLSDSVAITYRLFQSDC
KSMRQVADARSLPMAVVESHLLQAQKAGQPLDTERAGLSLSLFNTVTHILSSPPLSSDLS
DFKNIRAVVPEDISTFLLKLCVAKLQDEGFPKPQPVNLPSKQHHITWIEPQVGVGAGANA
NRVEKLDQADGAGKAVTSELRTHQLEPELDNMDNMDMSDDELFSELPMPEDVGTTRSVAQ
CEVQDGRPSKSSGIELASWNQENLDRDTQDLFSDSPVKAESQAPKRKMPDWAEAPTDSQN
AAASKKNKKKKGLFM
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggatcacactacacctggtgacaggtcacttccgggatggatgaccaaagaacatcac
catgatgatgataatgatgtacagtctcggtcacagggtatctacaaaaagaatgtcatc
gaggatgatcttccctatctggagtttggtggtagagttatatacagtcaggagaaaaac
gattgctcattcttaacagaggatttaagatcctctctcatgcctggctcagccgtaggc
ttcgatttagaatggcctccgtctttcaccaaagggaaaactaagaaggtggctttggtt
cagctttgcgcctcggaggagaaatgctacctttttcacatctcgtccatgtcaggattc
cctcctggcctaaagatgtttctggaggatgagagcattaaaaaggttggggtgggcgtc
gaaggtgataagtggaagctgctgtctgattacgaaattaagctgaagaattttgtagag
ctgtctgatttggcaaatgagaaactcagatgtgttgagaaatggagcttagatgggctg
gtcaagcacttgttcagtaaacggctctttaaagaaaaggatgtacgctgtggccagtgg
gacgactttgtgctgaccgaggaacagaaacgatatgctgcaacagatgcctatgctgga
tttatagcatatcaaaagctagaaagaatggaggtgaatccaggttcactgaaacttcaa
gaatgcttgaaacagaagctgggtcagattagccgagaacttgaggacattattagatgt
gttcctgagggactcagctgtacaagcagagctgaaaagctagtggaggacttatctcag
caagttgcatctctaaaagacttcctgacagccaaccacaacataagagaagaacgtttc
tctaacgccagcgcggatcacaatcctaaaatccagagtgctgagatcagcaccatgaat
cccgaacctaatcagacgtgttctaaagacagaaacggtcgtttctcatccagagaccct
gtaaagcatccatcgtcattagaaaatgatgatgttccgacagaacagagggaatacatc
atgtccttggatatctctgagtatgagcttcagatgttggagatgcaggccagacaggag
gagaatgaggagcaatccattttagctttcgaggcgaggtcggcaatggacgactctgcc
gagttgtcatacgaatgtgaaaatgatgaggagctcgacagtgaaatgattcagtgtgct
gaaaaaatggagaaactaaatgatagctttgaaaagcagcctaataaagctgagaccatt
gctgatgacgaagatgaggttgttgaagaggacgaagcagaaggatttgatgtaaacctt
ccccagccggctcctgaacagacaaaatgcctgaaaatgtattttggacatcacagtttt
aaaccggtacaatggaaagtgattcagtccgtgcttgagcagaagagggataaccttgtt
gtcatggcaactggttatggaaagagcttgtgtttccagtttcctcctgtgttctgtgtg
aacatcagcgtggtcatttccccactgatcgcattaatggaggaccaagtgatgcagctc
cagatgtccaacatccctgcttgtttccttggatcggcccagacccataacttaaatgac
gacttactgacggggcatttcagagtcgtatacatgacaccggaattctgctcaggaaac
atacctctacttcaacagctgaataaatcagtcgggatttgtctgatcgcagtagatgaa
gcacattgtatttcacagtgggggcatgactttagaagtgcttatcgagaccttggcaaa
ttaaaaagatgccttccacatgttcccattgtggcactcacagccacggcgagcccctct
attcgggacgacatagtgaagagcctccatttggtgaacccgctcgtcacttgcacttct
tttgaccggcccaacctgtatctggacgtgaaccgcaaatctggtgatgtcattcaagac
ctcaagtcgttccttgtgaagaagaaagggggtgattatgagtttgagggctcggctatt
atttactgcccatctaagaaggaagcagagagggtgacatctgctctgtacaagctgggc
atccgctgtggagtgtaccacgcaggtctcagcatcaaacggagaaaagagacgcagtat
cagttcatgagagatgagatacagtgtgtggtggctaccatagcttttggaatgggaatc
aacaagcctgatattagaaaagtaattcattacggagcaccaaaggagatggagtcttac
tatcaagagttcggacgagccgggagagacggactgcccagttcctgccatgtcctctgg
acacaaagtgacatggcactcaacaggtttcttctcagccagacgaggagtgagcgattc
aggggctacaaaatggaaatgatggccaagatggagaaatatttgaattccactaagtgc
agaaggaagttaatcttgtcacatttcgaggataaacagctcagaaaagtcacttcaggt
atactgggaaccagcaagtgttgcgacaactgcaagtctgggagcgttaaaagccagagc
caggactgttcagagcaggactttcaggagtttggcgtgtacgcattccaactgatgggg
gcagtgaaagcgatgggagaaaaatttggcatcacagctcccgtactactcctgcgtggc
tcgactgctcagagagttccagagcgctttcggcaagacgctttgttcggcacaggcaag
ggcatgtctgaagcctggtggagggcgctcgggcgggaacttatcagtgagaagtaccta
atggaagcctctggttataataagttcagcacactctgtaaactcactcccaagggcagg
acgtggctaagcaaagcccaggatgagaaacacagaactctccttcttcaacctaaccgg
gatctgtgtccaagagtttatgtgccaaagaaacaacaattttcgaattctgttgtggtt
ggtgttcgagaccaggccctaccaagtacaagtcagagaacaaatttcaggtcccaggtg
gactctagtgccgtgatcaagaatgacagagtggcacattataggtcagttcctggttcg
ccacttgctcccaaagccatgcctcagcctcctgcagtctctccaagagaaatggagtta
caggctgagctgtacagcaagctggtagctgagcggcaaaagctagccagtatgaaggac
atccctcctgccatcctagccaccaacaaaatcctcctggacctggccaagctaaggccc
tgctctgtagccaagttgaagcaggtagacggtgtgtcagaggctaaagcagccatgctg
gctcctctactccagaccatcacagacttctgcgagacacacagcctgcaggaggctgta
acttgcagctcttcaacttcctgtgatgaacaggcacacaggtcacagacaggaaaacca
ccagcacagtctctctctgacagcgtggccataacttataggcttttccagagtgattgc
aaaagcatgagacaagtagcagatgctcgaagcttgcccatggcagtggtggaatctcat
ttgctacaggctcagaaagccggccagcctctggacacagagcgagccggtctgtctttg
tctctgttcaacaccgtcacacacatcctgtcctctcctcctctcagctcagatctcagt
gacttcaaaaacattcgagctgtggtgccagaggacatcagcacttttctcctcaagctg
tgtgttgctaagctacaggatgaaggctttccaaagccacagcctgtcaacctgccatcc
aaacagcaccacatcacctggatagagcctcaggttggtgttggtgccggtgccaatgct
aatcgtgttgaaaagctcgaccaggcagatggtgctggtaaagccgtcacttcagagctc
agaactcaccagctggaaccagagctggacaatatggacaatatggacatgagcgacgat
gagctctttagtgaacttccaatgcctgaggatgtaggaacaaccagaagtgttgctcag
tgtgaggtacaagatggccggccttctaaaagcagtggaattgaactggcttcctggaac
caagagaacctggaccgggatactcaagacctgtttagtgattcaccggttaaggctgaa
agccaggcaccgaagaggaagatgcctgactgggcagaagcaccgacggactctcaaaat
gccgctgcatccaaaaaaaacaaaaaaaagaaagggctcttcatgtga
DBGET
integrated database retrieval system
