Clarias gariepinus (North African catfish): 128545569
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Entry
128545569 CDS
T10780
Symbol
cux1a
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128545569 (cux1a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
128545569 (cux1a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HNF-1_N
HTH_3
HTH_23
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
128545569
NCBI-ProteinID:
XP_053371972
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All DBs
Position
17:634614..668491
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AA seq
1039 aa
AA seq
DB search
MAAARAGLMCQRWRRFDLQQLQKDLDVAANALASTQHENEQTRKKLIEQSDELKRHTPED
LHQHITPLLKGFQSEIDALCERSKDSEAAFLSVYKRLIDVPDPVSALEAVQQLQLAVIKM
RDVEAENQKLRERLQEYDREVAEVKGQEETISGLREKLESYERLVHCVTEDEDEEEECSA
RKERPCESEAVMVEVETANQALEAELVVKQREVERLMEDVQKLQSSLTELSDSTANQIRE
LQQQLDSKHALLQEFEEKLEAQADYEEIKRELSILRSTELRPSQPPAEQGSPKQQDVSLP
GQEDSGQNQPVNSDLIGSAESHLPASPSRTPPQSGHAHSPTPPLSLILQKSHAPPESSRS
FSSDLLRRSFSAALPALSRKPSVNPFLQRTFGQNLQTDEEVDTAEIARQVKEQLMKHNIG
QRVFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMRHFLSDEQNILMLRSIQGRQ
RGSITSRARVPESSSDESLKSIFDQTKRDVKGYKTEGVHSSLSVSSDDNIRSVLDVQQVA
PSPTMTSDSSRLGSKLLCSTRSVLPYSPLELKSASSSPVDSWREPWWSALHCEQRKDTHS
QEDPEMSSTSETPHRSLLLPSSSSSSSSPSLQTKQMTPLTSEQYERFLQQEVDTAELTQQ
VKEKLTKSGICQRVFGEKVLGLSQGSVSDILSRPKQWNKLTQKGREPFIRMQLWIEGDLD
DPKRAETSASVSPAPESPESSSEELIKLVRDQQEEAEPESHDTAVSIQEVGVTAPELDTS
SISRRVREVLSHNNLGQHVFSEAVLGVTQGSVSDLLVRPKPWRRLSAKGREVFVRMQRWL
SDSSNVRDLRGDKPAESTAHLKRRASSVCEDGVPDSGVCVGESGQECVPQQKKSRVVLSA
EEKQALRNAYQERPYPSPGTVEELAQQLGLRASTVSNWFHNYRSRIRRGAFKETAAAKSD
DAPEGQTSGTQECPELPDATLNFPESSASAGVLRDSSLRRRKAANLNSIIHRLERAATRD
DAHEGQDGGEGQDGGAECV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgcgcgcaggactgatgtgccagcggtggcggcgctttgatctccagcag
ctgcagaaagacctggacgtcgccgccaacgctctcgccagcacacagcatgagaacgaa
caaactcggaaaaaactcatcgagcagagcgacgagctgaagagacacacacctgaggat
ttacaccaacacatcacgcctctgttaaagggcttccagtctgagatcgacgctttgtgt
gaaaggagtaaagactcagaggctgcgttcctcagtgtgtataagagattaatcgatgtc
ccagaccccgtgtctgcattagaggcagtgcagcagctgcagctcgcggttattaagatg
cgcgacgtggaggcagagaatcagaaacttagagagagactgcaggagtacgacagagaa
gttgcagaggtcaaaggtcaagaggaaacgattagcggtctgagggagaaactggagtct
tatgaacgtttggttcattgcgtaacagaagatgaggatgaagaagaagaatgcagcgca
agaaaggaaaggccgtgcgagagtgaagcggtgatggtggaagtagagacagccaatcag
gctctggaggcggagcttgtggtgaagcagagagaggtggagcgtctgatggaggacgta
cagaaactccagagcagcctgactgaactcagcgactcaacagccaatcagatccgagaa
ctacagcagcagctcgactccaaacacgctctgttgcaggagttcgaggagaaactggag
gctcaggcagattatgaggagatcaaaagggagctgagcatcctgagatccacggagctc
cggccctcacagcctcctgcggaacagggttccccgaaacagcaggacgtgtcacttccc
gggcaggaggacagcggccaaaaccaacccgttaacagtgacctcatcggttctgcagag
tctcatcttcctgcctcaccctcccgcacaccgcctcaatctggacacgcccactcaccg
actccacccctttcgcttatcctccagaagagccacgcccctcccgagtcgtcccgctct
ttctcttctgatctgctgaggcgcagcttcagtgcggctctccctgcgctctccaggaaa
ccctcggtgaacccgttcctccagcggacgtttggacagaacctgcagacggacgaggag
gtggacacggccgaaatcgcgcggcaggtgaaggagcagctgatgaagcacaacatcgga
cagcgcgtgttcggacactacgtgctcgggttatctcaggggtccgtcagcgagatcctc
gctcgccccaaaccctggaacaaactcaccgtccgcgggaaagaaccgttccacaagatg
aggcacttcctgtctgacgagcagaacatcctgatgctgaggagcattcaggggcgacag
aggggcagtatcaccagtagagcccgtgttcctgaaagcagctctgatgaatccctaaag
tccatttttgatcaaactaaaagggatgtgaagggatacaaaactgaaggcgtccactcg
tctttatcggtttcctcggatgacaacattcgctccgtcctggacgtccagcaggtggcg
cccagtcccacgatgacctccgactcttccaggttgggctccaaactgctgtgttccacc
aggtctgtgctgccgtattcacctctggagctaaaaagcgcgtcttcgtctcctgtggac
tcctggagggagccgtggtggagtgcgctacactgcgaacagcgcaaagacacacactct
caggaagaccccgagatgtccagcaccagcgagacgcctcacagaagcctgttgctgcct
tcctcttcctcttcctcttcttccccgtccctgcaaacaaagcagatgacgccgctaacg
tccgagcagtacgagcgattcctgcagcaggaagtggacacggcggagctcacgcagcag
gtcaaagagaaactcaccaagagcggcatctgccagagagtgttcggggaaaaggttctg
ggcctctctcagggcagtgtgagtgacatcctctctcggccaaagcagtggaataaactg
actcagaaaggcagagagccgtttatacgcatgcagctgtggattgaaggagacctggac
gaccccaagagagcagagacctcagcaagtgtaagccccgcccccgagtctcctgagagc
tcgtcagaggagctcattaagctcgttagggaccaacaggaagaggcggagcctgagtca
catgacacagcagtgagcatacaggaagtcggggtcacggcgccggaactcgacacctcc
tccatcagcaggcgggtcagagaggtgctgagccataacaacctcggacagcatgtgttt
agtgaagctgttttgggcgtgactcagggttcggtgtcggatcttctggttcggcccaaa
ccctggcgcagactgagtgcgaaaggccgcgaggtgtttgtgcgaatgcagcgctggctg
agcgactcgagtaacgtccgcgacctgaggggcgacaaacccgctgagagcacagcacat
ctaaagaggcgagcgagctcggtgtgtgaggacggcgtgccggacagcggtgtgtgtgtg
ggagagtcgggacaggagtgtgttccccagcagaagaagtctcgtgtggtcctgagtgcg
gaggagaagcaggctctgaggaacgcctaccaggagagaccgtacccctcaccaggaacc
gtcgaggaactcgctcagcagctcggcctcagagccagcaccgtctccaactggttccac
aactacaggtctcgtattcggcgtggagccttcaaggaaacagccgcagcgaaatcggac
gacgcccccgagggacagacgagcggaacgcaggagtgtcccgagctcccagacgcaaca
cttaacttcccagaatcctctgcttcggccggagtgttgagagacagcagcctgcgccgg
cgcaaagccgccaacctgaacagcatcatccaccggctggagagagcggcgacccgggac
gacgcccacgaggggcaggacgggggcgaggggcaggatgggggggcggagtgtgtgtga
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integrated database retrieval system
