Clarias gariepinus (North African catfish): 128545573
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Entry
128545573 CDS
T10780
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128545573 (ppwd1)
03110 Chaperones and folding catalysts [BR:
cgar03110
]
128545573 (ppwd1)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
128545573 (ppwd1)
Spliceosome [BR:
cgar03041
]
Complex C
Other components
PPlases
128545573 (ppwd1)
Chaperones and folding catalysts [BR:
cgar03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
128545573 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_TEP1_2nd
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
WD40_Gbeta
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
128545573
NCBI-ProteinID:
XP_053371981
LinkDB
All DBs
Position
17:30363759..30372110
Genome browser
AA seq
626 aa
AA seq
DB search
MASGAESESLENKRKLKADEGEDEEEDAWVGPLPTEAAPAKKRKVLEYERVYLDNLPSAA
MYERSYMHRDVITHLACTKTDFLITASQDGHVKFWKKKEDEGIEFVKHFRSHLGVIECIS
VSAEGALLCTVGDDRAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAISTVACSEKSC
GRIHVYDGRGSNTPLHTFDKLHSAPLCHIRLNPRFRVIVSADRAGMLEYWTGLPSEFKFP
RQVEWEYKTDTDLYEFAKCKTFPTSLAFSHDGKKMAAIAADRKVRIFRFLTGKLARVFDE
SLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDAIRLTNIIFDETGHFVLYGTMLGIKV
INVETNRCVRILGKQENIRVVQLSLFQGVAKTLKAAPTIEMKASDNPALQSTEPDPTIFC
TAFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTM
GDIHLKLCPVECPKTVENFCVHSRNGYYNGHVFHRVIKGFMIQTGDPTGTGMGGESIWGG
EFEDEFHFSLRHDRPYTLSMANAGPGTNGSQFFITVVPTPWLDNKHTVFGRTTKGMEVVQ
RISNVKVNPKTDKPYEDISIINITIK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcgcggagagtgaaagtttggagaataaacgcaagttaaaggcagatgaa
ggtgaagatgaggaggaggacgcgtgggtcggaccgctgcctactgaagctgctccggct
aagaagcggaaagtactggagtatgagagagtttacctggacaatctgccttctgctgcc
atgtacgagcggagctacatgcaccgtgatgtcattacccacctcgcctgcaccaagacg
gatttcctgataacggcaagtcaggatggacacgtcaagttctggaagaagaaagaagac
gaagggatcgagtttgtgaagcactttcgcagccacctgggtgtgatcgagtgtatttcg
gtcagtgctgaaggagcactcctgtgcactgtgggggatgatcgggccatgaaggtgttt
gatgtggtgaatttcgacatgatcaacatgctgaagctggggttccaccctggtcagtgt
gagtggatctataaccccggagacgccatcagcacagtggcctgctctgagaagtcctgt
gggaggatccacgtgtatgacggccggggcagcaacacaccgctgcacaccttcgacaag
ctgcactcggctcctctgtgtcatatccggctgaacccgcgcttccgtgtcatcgtgtcg
gccgacagagccgggatgctggagtactggactggactcccgagtgagttcaaattcccc
aggcaggtggagtgggagtataaaaccgacacagacctgtacgagttcgccaagtgtaaa
acctttcccaccagcctggccttctcacacgacgggaagaagatggccgccatcgccgcc
gaccgcaaagtccgcatcttccgcttcctgaccgggaaactcgcccgcgtattcgacgag
tcgctgaccatgttcacagagctgcagcagatgaggcagcagctaccggacatggagttt
ggccgcaggatggcggtggagagagagctggagaaagtggacgctattcgactgaccaac
attatcttcgacgagacgggacactttgttctctatggaaccatgctgggcatcaaggtc
atcaacgtggagaccaaccggtgtgtgaggattttggggaaacaggagaacatccgtgtg
gtgcagctaagtctcttccagggcgtggctaagactctgaaggcggcaccaaccatcgag
atgaaggcgtctgataatcccgccctccagagtaccgaacccgaccccaccatcttctgc
accgccttcaaaaagaaccgcttctacatgttcacaaagcgagagccagaggacaccaag
agcgccgactcggacagagacgtcttcaatgagaagccgtccaaagaagaggtgatggcc
gccacgcaggcagaaggcccgaagagggtctcggacagcgccatcatccacaccactatg
ggagacatccacctaaagctgtgtcctgtggagtgccccaaaactgtggagaatttctgt
gttcacagcaggaacggctactacaacggccacgtatttcatcgcgtcatcaaggggttc
atgatccagaccggagaccccacaggaacagggatgggaggagagagcatctggggcgga
gagttcgaggatgagtttcacttcagtctgagacacgaccggccgtacacactcagcatg
gccaacgctggaccaggaaccaacggctcccagtttttcatcacagtggtgcccacgcca
tggctcgacaacaagcacacagttttcgggcgaaccaccaaaggcatggaggtggtgcag
aggatctccaacgtcaaggtcaacccaaagacagacaaaccatacgaggacatcagcatc
atcaacatcaccatcaagtag
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