Clarias gariepinus (North African catfish): 128545574
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Entry
128545574 CDS
T10780
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128545574 (trim23)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128545574 (trim23)
GTP-binding proteins [BR:
cgar04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
128545574 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128545574
NCBI-ProteinID:
XP_053371982
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Position
17:complement(30372948..30380617)
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AA seq
579 aa
AA seq
DB search
MAAAAAAAVGVSKHTMEPCVRHGRGTAGNTVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQATELGDSGVWGLKKNFALLELLERLQNGASNQSGMSEE
ALREMGECIIRCDEDESHTASVYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHEK
TLCLQHQVHAIEFVCLEEGCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRTFTEEVSEYSRKLVGIVQQIEGGEQIVEDGVGMAHTEHVPGTAENARSCVRAYFADL
HETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSSACLHCEKTLQQDDCRVVL
AKQEINRLLETLQKQQQQFTEMADHVQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDGA
GKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAV
VFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAVAVEEMTELLSLHKL
CCGRSWHIQGCDARSGTGLHEGLDWLSRQLVAAGVLDVA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgctgctgctgctgtcggtgtcagtaagcacacgatggagccgtgtgtc
cgccatggcagaggaactgcgggcaacacggtgaaggtgctggagtgtggtgtgtgtgag
gacgtgttctctctgcagggtgataaagttcctcggctcctgctgtgtggtcacaccgtg
tgtcacgactgtttaacccgtctccctcttcatggccgagccgtacgctgtcctttcgac
agacaggccaccgagctgggagactcgggtgtgtggggcttgaagaagaacttcgctctg
ctggagctgctggagcggctgcagaacggcgcctccaatcagtcagggatgtcagaagaa
gccctgagagagatgggagagtgcatcatccggtgtgacgaggacgagagccacactgcg
tcggtgtactgcacggtgtgcgccacacacttgtgtgccgagtgttctcagctcacacac
tccacccgcacgctggccaaacaccgccgcgtcccgctggccgacaagccgcacgagaag
acgctgtgccttcagcaccaggtccacgccatcgagttcgtgtgtctggaggaggggtgc
cagcccggcccgctcatgtgctgcgtctgcaaagagtacggcaagcaccaaggacataag
catgcagttctggaagccgaagccaaccagatccgggcgtcgatcctggacatggcgcac
tgcatccgcaccttcacggaggaagtgtccgagtattccaggaagctggtgggcatcgtg
cagcagatcgaagggggggagcagatcgtagaggacggcgtgggcatggctcatactgaa
catgttcccggcacagcggaaaacgcgcggtcgtgtgtgcgggcgtacttcgccgatctc
cacgagactctgtgccgccaggaggagatggcactcagcgtggtggacgctcacgtcagg
gagagactcatctggctccggcagcaacaggaggacatgaccatcctgctgtctcaggtg
tccagcgcctgtctccactgtgagaagaccctgcagcaggatgactgcagggtggttctg
gcgaagcaggagattaacaggctgttggagacgctgcagaaacagcagcagcagttcaca
gaaatggccgatcacgtccagctggatgcaggcatcccggtcacattcaccaaggataac
cgcgtgcacatcggccccaagatggagatccgggtggtgacgctggggctggacggggca
ggaaagaccaccatcctgttcaagttgaagcaggacgagttcatgcagcccatccccact
atagggtttaacgtggaaacggtggagtataaaaacctgaagttcaccatctgggacgtt
ggagggaaacacaaactgagaccgctgtggaagcactactacctgaacacacaagcggtg
gtgtttgtgattgacagctgtcacagagacagactgatggaggctcacagcgagctggcc
aagctgctgaccgagaaagagctgagagacgccctgctgctcatcttcgccaacaaacag
gacgtgcccggtgccgtggcagtggaagagatgacggagctcctgagcctccataagctg
tgctgtgggcggagctggcacattcagggctgcgacgctcgcagtggtacgggtctgcac
gagggtctggactggctctcgcgccagctggtggctgcaggggttctggacgtggcctaa
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