KEGG   Clarias gariepinus (North African catfish): 128545603
Entry
128545603         CDS       T10780                                 
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar02010  ABC transporters
cgar04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    128545603 (abca1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    128545603 (abca1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cgar02000]
    128545603 (abca1b)
Transporters [BR:cgar02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    128545603 (abca1b)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 R1_ABCA1 AAA_21 DUF4162 SRP54 AAA_23
Other DBs
NCBI-GeneID: 128545603
NCBI-ProteinID: XP_053372043
LinkDB
Position
2:18041566..18074788
AA seq 2284 aa
MSVSTQLGLLLWKNFTYRKRQTFQLLIEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELINAVKDMQNSSSGFKLKDFLNDNETLSTFLLQNASITDNVVQEILMAEVNLE
KVLTRGYGVHLRTMCNTSILEQFVTFPNREVAELTQNVICGSPQHWLNQAEKHFLANLDF
FRPLRSDVRSERNDTTLHVAKATDNLLESLGSVAVELASMRSWSDLRNEILFLTQNATGS
PGQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFKAMFGNYNSSEDEPVSVYDNTTTPYC
NNLIKKMETSPISRMIWSALKPLLMGKILYTPHTPATQKIIQEVNRTFQELGILRDLGGM
WDEARPKVWNFMENSEEVNLVRMLLQNNVTAYFFSAQLSGTKWSVQDLSSFLTKQSEDTR
PPGTAYTWRNVLNETDQAIMSISRFMECVNLDKLEAVSTEEKLVNESLGLLDNRKFWAGI
VFPDIDLNSSELPPHVNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFSYL
QDVIEQSIIRAVTGTKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVFALRMGNLLPYSDAG
VIFLFLGSFAVVTIMQCFLISTAFSRANLAAACGGIIYFTLYLPYVLCVAWEDYVGLSAK
VIASLLSPVAFGFGCEYFALFEEQGVGIQWSNLISSPMEGDEYSLTTAIIMMYVDAFIYG
LMTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEGEQNQAPTIQGKKTNSKAVCTEEEPTHL
ELGVYIKNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYIMGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEQKVKAEMDQI
LYDTGLPHKRKSKTSELSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKEPE
ASLSSSRNSTTTESYIKKDEEDSESSSDAGLGSDHESDAATAICTPWTDSPVAPADISLV
SGLIIKHVPNSRMVEDLGHEITYILPYESAKDGAFVDLFHDLDDHLADLGISSYGVSDTT
LEEIFLKVAEDSGVDTEMMSDGTLPIRRRRRHAFGADHQSCLKPLTEDDNFDGNDSEADP
DSRETDHLNSTDGKGSYQVQSWSLTRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCI
ALVFSLIVPPFGKYPSLALQPWMYEEQVTFISNDAPEDASTQNLLSALTEGPGFGTRCME
GYSIPDAPCNMGDDEWSIPEVTENLWEVFRNANWTMENPSPECECSCDGKKQMLPACPAG
AGGLPPPQIRISDRDVLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGAR
STQVLPPAEEIDDAISRVREIFQLRKNTGTAADRFLNSLSAFINGLDTKNNVKIWFNNKG
WHSIGSFLNVMNNGILRANLPPGKDPSKYGITVYNHPLNLTKEQISQVALVTTSVDVLVS
ICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPYLYWLANFTWDMCNYIVPATLVI
IIFVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFQIPSTAYVVLTSVNILIG
INGSVSTFVLELFGGDKVGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGEN
RFRSPLEWDMVGKNLFAMAVEGLVFFIITVLIQYRFFIKPRALRPKLSPIGEEDEDVARE
RQRIVSGAGQGDILELRELTKVYERKKKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKM
LTGDSAVTSGEAFLARKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPE
GEVCEVAEWGIRKLGLIKYADKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPK
ARRALWNCIHSVIKMGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDG
YTIILRVAGPEPDLQPVMKFIEIELPGSILKEKHRNMLQYQLPSSLSSLAHIFSILAKHK
DFLQIEDYSVSQTTLDQVFVNFAKDQSDDHCDHSIRRKKVIVNIPLLSLPATLKDEENHK
EHFV
NT seq 6855 nt   +upstreamnt  +downstreamnt
atgtctgtctccactcagctgggcctgctgctgtggaagaacttcacttataggaaacga
cagacgttccagctgctaattgagatcgtatggcccctcttcattttcttcatcttgatt
gctgtgagattgaactaccccccatatgaacaacatgagtgtcactttcccaataaagcc
atgccctcagcaggcaccttgccatggatccagggcattgtgtgtaatgccaataaccca
tgcttccgtcaccccaccccgggagaatctcctggagtagtcggcaacttcaatgattca
ataatatcaagacttttttcggatgccaagaaaatcctcctgtacagtcaaaatgacaaa
agtctggatgggtttaaagagttaatcaatgcagtgaaagacatgcagaacagctcatca
ggtttcaagcttaaagacttcctaaatgacaacgagaccctgtctacattcctcctgcaa
aatgcttccatcacagataatgtggtacaggagattttaatggcagaagtgaacctggaa
aaggtgctaacacgaggctatggggttcatctgaggaccatgtgtaacacttccatcttg
gaacaatttgtgactttcccaaacagagaagtagcagaacttacccaaaacgtgatctgt
ggctcacctcagcactggctgaaccaagccgagaaacacttcctggccaatctggacttc
tttagacctttgaggtcggacgtaagatctgagagaaatgacaccaccctccatgtcgcc
aaagccacggacaacctcttggaaagcctgggttctgtagcggtggagttggccagcatg
cggagttggagcgacctgcgcaatgagatcctcttcctgacccagaatgccactggttcg
cccggtcagatgtaccaggctgtgtcacgaatagtgtgtggacaccctgaaggtggcggc
cttaaaatcaagtcacttaactggtacgaggacagcaatttcaaagcgatgtttggcaac
tacaacagcagtgaagacgaacctgtttctgtctacgacaacacgaccacaccctactgt
aacaatctaataaagaagatggagactagccccatctctcggatgatctggagcgcactg
aaacctctgcttatggggaagattctgtacacacctcacacccctgccacacaaaagatc
atccaagaggtgaacaggacatttcaggagcttggaattctcagagatctgggtggaatg
tgggatgaagccaggcccaaggtgtggaacttcatggagaacagtgaagaggtgaaccta
gtacggatgttactacagaacaatgtcacagcctatttcttcagtgcccagctgagtggt
actaagtggagtgtacaggatcttagtagtttcctgaccaagcagtcagaggacactcgt
ccacctgggacagcttacacatggagaaatgtcttaaatgaaaccgatcaggctattatg
agcatatcccgcttcatggagtgtgtgaatttggataaattagaggctgtgagcactgag
gagaagttagtgaacgagtctcttgggctgctggacaacaggaagttctgggctggaatt
gtcttccctgatattgacctaaacagctcagagcttcctccccatgtcaactacaaaatc
cggatggatattgacaatgtggagcgcaccaacaagatcaaggatgcttactgggaccct
ggccccagagctgacccatttgaggacatgcggtacatttggggcggtttctcttacctt
caggatgttatagagcagagcatcatcagagcagtaacaggaactaaagagaagactgga
atctacatccagcagatgccttatccatgctatgtcgatgacattttcttgcgtgtgatg
agccgctccatgcctctatttatgaccctagcttggatgtactctgtggctataataata
aaaagtgttgtctatgagaaggaagcccgccttaaggagaccatgaggattatgggattg
gacaacggcatcctgtggttcagttggttcatcagcagtcttattccacttctcatgagt
gctggactacttgtgtttgcgctcaggatgggaaacctgcttccctacagtgatgctggt
gtgatcttcctctttttgggatccttcgctgtggtcactatcatgcagtgtttcctcatc
agcacagcattttctcgggcaaacctggctgcggcgtgcggaggaattatttactttaca
ctctacctgccttacgtgctgtgtgtcgcctgggaggattacgtgggtctttctgctaaa
gttatcgctagtcttctttctcctgtggcctttggatttggctgtgagtattttgccctg
tttgaagagcagggagtggggatccagtggagcaacctcatctctagcccaatggaaggg
gatgagtacagtctcactactgccattatcatgatgtacgtcgatgccttcatctatggc
ctcatgacctggtacattgaggcggtgtttcctggtcagtatggtattcccagaccatgg
tacttcccattcaccaagtcttactggtttggagaaggagagcaaaatcaggcacccaca
atacagggaaagaagacaaattcaaaagctgtctgcacagaggaagagcccacgcatctt
gaactaggggtgtatattaagaacttggtgaaggtctatcggcatggcaaaaagcttgct
gtggatggtctgacactgggattctatgagggtcagattacatctttcttggggcacaat
ggagcaggaaaaaccaccaccatgtccatcctgactggcttgtttccaccaacatctgga
acagcatacatcatgggtaaagacatccggtcagagctaagtgccatccggcagagcctg
ggagtttgtcctcagcacaatgtccttttcagcatgctaacagtggaggagcatatctgg
ttctatgcacgactcaaaggcctctccgaacagaaggtgaaggctgagatggatcagatt
ttgtatgacaccggtctgccacacaaacgcaaatccaaaaccagtgaactatctggtggc
atgcagagaaagctttcagtggcccttgcatttgttggagggtcaaaggtggtcattctc
gatgagccaactgccggagtggacccttacgctcgcaggggcatctgggacctcctgctg
aaatatcgtgcaggccgaactatcatcctttccactcatcacatggacgaagcagatatc
ttgggcgatcgtattgccattatctctcatggaaagctatgctgtgtgggctcctctctc
ttcctgaaaactcatctgggaactggatattacttaacactggtgaagaaggaaccagaa
gcttccctgagctccagcagaaactccacaaccactgaatcttatatcaagaaggatgaa
gaagactcggagagcagctcggatgccggtttgggaagtgaccatgagagcgatgccgcc
acagctatctgcaccccgtggacagattcacctgttgctcctgcagacatctctctagtc
tcaggtctaatcattaagcatgtccctaactcacgcatggtggaagatctgggacatgag
atcacctacattctgccttatgaatcggctaaagatggcgcatttgttgacctcttccat
gatttggatgaccatctcgctgatttgggcatctcgagttatggtgtttcagacaccaca
cttgaagagattttcctcaaagtggcagaggacagtggggttgacactgaaatgatgtca
gatggcacactccctatacgcagacgcagacgacatgcttttggagctgatcaccagagc
tgccttaaacccctgactgaggatgacaactttgacggtaacgactctgaagccgaccca
gattcaagagagactgatcacttaaatagtactgatgggaaaggttcataccaagtccaa
agctggagcttgacaagacagcagtttgtggctttgctgtggaaaagattcctgtatgcc
cgtcgttccaggaaaggcttcttcgctcagattgtcctgcctgcagtatttgtgtgcatc
gctctggtctttagtcttattgtacctcccttcggaaaatacccaagtcttgccctgcag
ccatggatgtatgaggaacaagtaacctttatcagcaatgatgcacctgaagacgccagc
actcaaaacctactctcggcactaacagaagggcccggttttggaacacgctgcatggag
ggatattcaataccagatgctccctgtaatatgggtgatgatgaatggtccataccagag
gtcacagaaaatttgtgggaggtgttcaggaatgcaaactggaccatggaaaacccatca
ccagaatgtgaatgcagttgtgatggcaagaaacagatgctcccagcctgccctgctggt
gctggaggtcttccacctccacagataaggatcagtgatagggacgtacttcaaaacctg
actggaagaaacatctcggactacttggtgaagacgtatgcacaaatcattggcaaaagt
ttaaagaacaaggtgtgggtgaatgagttcagatatggaggtttctcactgggtgctaga
agcactcaggttctaccgcctgccgaggagattgatgatgccatttcacgagtgagggaa
atattccaactgcgcaagaacacagggacagcagctgatcgctttctaaacagcctctct
gctttcatcaacggcctggacactaaaaataatgtgaagatctggttcaataacaagggc
tggcacagcattgggtcctttctcaatgtgatgaacaacggtattttgagggccaatttg
cctcccgggaaagacccaagcaaatacggcatcactgtgtacaatcaccccctgaacctt
actaaagagcagatctcccaggtggcactggtgacgacctcagtggacgtactggtgtcc
atctgcgttatcttcgctatgtcatttgtccctgctagctttgttgtctttctcattcaa
gaacgtgtaagcaaggccaagcatatgcaattcatcagtggagtgcagccatacctctac
tggttggccaattttacctgggatatgtgcaattacatcgtcccagcaaccttggtcata
atcatcttcgtgtgctttcaacaaaaagcctatgtgtcagccacaaatctgccagtactc
gccctattgctgcttctatatggatggtccatcactcctctgatgtacccagcttccttc
ctgttccagatccccagcactgcgtacgttgtcctaaccagtgtcaacatactgattggg
atcaatggcagtgtgtccacttttgttctggagttgtttggtggcgataaagttggtggc
atcaatgacatactgaagaatgtcctcttgatcttccctcacttctgtcttggacgaggc
ctgattgacatggtgaagaaccaggccatggctgatgctctcgagagatttggagagaac
cgtttccgctctcctttggaatgggacatggtgggtaagaacctgtttgccatggcagtg
gaaggattagtcttcttcatcatcacggtcctcatacagtaccggttcttcatcaaaccc
agagctcttcgtcctaagctgagtccaattggcgaggaagatgaggatgtggccagggaa
cggcagagaatcgttagtggagcaggacaaggagacatccttgaacttcgagaactcaca
aaggtgtatgaaaggaagaagaagcctgctgtggataggctgtgcgtgggaattcctcca
ggagagtgctttggtctgcttggagtgaatggagctgggaagacaagtacctttaaaatg
ctgacaggagattctgcagttaccagtggagaagcgttcctagctaggaagagtatactc
agggaaatagatgaggtacatcagaacatgggctattgtcctcagtttgatgccatcaat
gacctgctgacaggcagagagcacctggagttctatgccattctgcgtggtgttcccgaa
ggggaagtgtgtgaggtggctgagtggggcatccgcaagctgggcctcataaaatatgct
gacaaagcagctggaagctacagcgggggcaacatgcgcaaactctctacagccatggcc
ctcatcggaggcccaccagtggtctttctggatgaacccaccactggcatggaccccaag
gcccgcagagctctgtggaactgcatccacagtgtcatcaaaatgggccgctcagtcgtg
ctgacttcacacagcatggaggagtgtgaggccctgtgcacccggatggccatcatggta
aacggcagattccgctgtctaggaagcgttcaacatctgaaaaacaggtttggtgatgga
tacaccatcatcctgagagtggcaggacccgaaccagacctgcagcccgtgatgaagttc
attgagatcgagctgcctggtagtatactgaaggagaaacacagaaacatgctgcagtac
cagctgccctcgtccctgtcctctctcgctcacatcttcagcattcttgccaaacataaa
gattttctccagatagaagactactccgtttcacagaccacactggatcaggtgtttgtt
aattttgccaaggaccaaagtgatgatcactgtgaccactccatacgccgtaaaaaggtc
atcgtaaacattcctctgctcagcctaccagcaaccttaaaggatgaggagaatcacaaa
gagcactttgtgtga

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