Clarias gariepinus (North African catfish): 128545612
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Entry
128545612 CDS
T10780
Symbol
hnrnpd
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein D0 isoform X1
KO
K13044
heterogeneous nuclear ribonucleoprotein A/B/D
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128545612 (hnrnpd)
Spliceosome [BR:
cgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
128545612 (hnrnpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
CBFNT
RRM_PARP14_1
RRM_3
Nup35_RRM_2
NID
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
128545612
NCBI-ProteinID:
XP_053372046
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All DBs
Position
17:complement(21472550..21479325)
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AA seq
310 aa
AA seq
DB search
MEEQFIGEDPTMKMEEDEEASMEEQIQAVSDGGPGESEGSKIDASKNEEDEGKMFVGGLS
WDTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFILFKDAESVEKVIQQKEHKLNGK
VIDPKKAKAMKSKEPVKKIFVGGISPDTPEDKIREYFHAFGEVESIELPMENKTNKRRGF
CFITFSEEEPVKKIMEKKYHNIGLSKCEVKVAMSKEQYQQQQWGGRGGFTSRGRGRGGPN
QNWNQGYGNYWNQGYGNYGNYGYNNQGYGGYGGYDYSGYNYYGYGDYSNQQSGYGKSPRR
GGHQNSYKPY
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagttcatcggagaggatccgactatgaagatggaggaagacgaagaagcg
agtatggaagaacagatacaggcggtcagtgatggaggtccgggagaaagcgagggatcg
aagattgatgcgagtaaaaacgaggaagatgaagggaaaatgtttgttggaggtctgagc
tgggacacaacgaaaaaggacttgaaagattacttcgccaagtttggggaggttgtagac
tgcactttaaagctggatcctatgactggtcgatccagaggcttcggcttcatactgttt
aaagatgctgaaagtgtggaaaaggttattcaacaaaaagaacacaaacttaatggaaaa
gtgatcgacccaaagaaagcaaaagccatgaaatctaaggaacctgtgaagaagatcttc
gtcggcggcatttcaccagacactcccgaggataagattagagagtactttcatgcattt
ggagaggtggagtctattgagttgccaatggagaacaaaacaaataaaaggcgaggattc
tgttttattaccttcagtgaggaggaaccagtaaagaaaatcatggaaaagaagtaccat
aacattggcctaagcaagtgtgaagtcaaagtggcaatgtcaaaggagcagtaccagcag
cagcagtggggtggcagaggtggcttcacctctcgaggtcgtgggagaggagggcctaat
caaaattggaaccagggatatggaaactactggaatcaaggatatggaaattatggaaac
tatggctacaacaatcaaggctatggtggatacgggggatatgattactcgggttacaac
tactacggatatggtgactacagcaaccagcagagtggttacggcaaatctccaaggcga
ggtggccatcaaaacagttacaagccatactag
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