Clarias gariepinus (North African catfish): 128545614
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Entry
128545614 CDS
T10780
Symbol
si:ch73-234b20.5
Name
(RefSeq) vesicle-associated membrane protein 8
KO
K08512
vesicle-associated membrane protein 8
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128545614 (si:ch73-234b20.5)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128545614 (si:ch73-234b20.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128545614 (si:ch73-234b20.5)
Membrane trafficking [BR:
cgar04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
128545614 (si:ch73-234b20.5)
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Integrase_H2C2
DUF2976
Prominin
MCU
DUF2207_C
Fzo_mitofusin
CD34_antigen
VirB8
PBP1_TM
Amnionless
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
128545614
NCBI-ProteinID:
XP_053372052
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Position
17:21470613..21472554
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AA seq
102 aa
AA seq
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MAEQNVQPQGSSKMHQVQEQVNDVKIILKDNINKVLERGERLDDLIEKTDDLQATADSFQ
KTSARVSRKYWWKNIKMMIIIGVIVSIIVLFIILLATGVIPT
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaaaatgtccaaccccaaggctctagtaagatgcatcaagtgcaggagcaa
gtcaatgatgtcaaaattatcctcaaagacaacataaacaaagttttggaaaggggagag
aggctagatgacctaatcgagaaaacagatgatctgcaagccactgcggactcgtttcaa
aagacgtctgcacgagtatccagaaagtattggtggaaaaacatcaaaatgatgattata
attggagtgatcgtgtccatcattgttttgttcatcattcttttggcgactggagtcatt
cctacataa
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