Clarias gariepinus (North African catfish): 128545619
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Entry
128545619 CDS
T10780
Symbol
lmnb1
Name
(RefSeq) lamin-B1
KO
K07611
lamin B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04210
Apoptosis
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128545619 (lmnb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128545619 (lmnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128545619 (lmnb1)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
128545619 (lmnb1)
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GFIT
Motif
Pfam:
Filament
LTD
Myosin_tail_1
CENP-F_leu_zip
DUF1326
ATG16
Motif
Other DBs
NCBI-GeneID:
128545619
NCBI-ProteinID:
XP_053372061
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Position
17:complement(18899102..18912631)
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AA seq
587 aa
AA seq
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MATATSTPAGQRISTRASTGAGTPLSPTRITRLQEKEELSHLNDRLAVYIDKVRSLESEN
SVLHLKISEKEEVRSRELTGLKSLYENELADARRSLDDTAKERARLQIELGKLRTEHEQL
LQNYTKKDTDLANSQARLKDVEALLNTKEASLATAYSEKKGLEAMLADLQAQIQELEAGL
VSAKKQLGEETLLRVDVENRCQSLVEELDFRKNMFEEEIKDTRRRHETRLVEVDSGHQKE
YEFKLAEALADMRQQHDEQVKHYKEEMEQTYLAKMENIRLSSEMNSSSASLAREELKESA
LRVESLAAQLASMQKETRGWQDRINELEAALAQEKDISRRMLAEKEREIAEIRAKMQQQL
DEYEQLLDVKLALDMEINAYRKLLEGEEERLKLSPSPSSRVTVSRASSSRSVRTTRGKRK
RVDVEESEASSSVSIAHSASATGNVCIDELDVDGKFIRLHNNSDQDQAMVGFELTRIIGE
TSATYKFTPKYVLKAGQKVSIWASNAGVSSNPPTDLIWKTQSSWGTGENIKVVLTNPEGE
EVAVRSTVFQTATVEEEDDGVEAIEEEFFLQQGEPPRDGAKRGCLIM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccacttccaccccggccggccagagaataagcacgcgcgcgagcaccggc
gcaggcactcctctgagccccacgaggatcaccaggctgcaggagaaagaggagctcagc
cacctcaacgaccgcctcgccgtttacatcgacaaagtccggagtctcgagtctgagaac
agcgttcttcacctgaagatttctgagaaggaggaggtgagaagccgggagctgaccggc
ctcaagtctctctatgagaatgagctggcggacgcgcggcgctctctggacgacacggct
aaagagcgggccaggctgcagatcgagctgggaaaactccgaaccgagcatgaacaactg
ctgcagaactacactaaaaaggacactgacctggctaactctcaggccaggctgaaggat
gttgaggcactattgaacactaaggaggccagtctggccacagcctactctgagaagaaa
ggcttggaagcaatgctagcagatctgcaagcccagatacaggagctggaggccggactg
gtctctgctaagaagcagctaggagaagagactctgctgagggtggacgtggagaaccgc
tgccagagcctggtagaggagcttgacttccgcaaaaacatgtttgaggaggaaattaag
gacacccggcgcaggcacgagacccgtctggtggaagtggactctggccatcaaaaggag
tacgagtttaagctggctgaggcactggcggatatgaggcagcagcatgacgagcaagtc
aaacactacaaggaagagatggagcagacctacctggccaagatggagaacatacgcctg
tcttcagagatgaacagcagttcagcaagcttggcacgggaagaactgaaggagtctgct
ttgagggtcgagagtctggcggctcagctggcaagcatgcagaaggagacacgaggctgg
caggatcgcatcaatgaactggaggctgccctggctcaagagaaggatataagtcgcagg
atgctggctgaaaaagagcgcgagatcgctgagatccgagccaagatgcagcagcagcta
gatgagtacgaacagttgctggatgtcaaactggccctggacatggagatcaatgcctac
aggaagcttctggagggcgaggaggagaggttaaagctttctcccagcccctcgtctcgt
gtgactgtgtctcgggcctcgtccagccgcagcgttcgcaccacacgtgggaagaggaag
cgtgtagatgtggaggagtctgaagcaagcagcagtgtcagcatcgcccactcagcttct
gccactggcaacgtttgcatcgatgagcttgacgtagatggcaagttcatccgactgcac
aacaactctgatcaggaccaggcaatggttgggtttgaactgactagaattattggagaa
acttctgctacctacaagttcactcccaaatatgtcctgaaagctggacagaaagtctct
atctgggcatctaatgcaggtgtgagctccaaccctcccactgacctcatctggaagacc
cagagctcctggggcactggtgagaacatcaaggtggtcctgaccaaccctgagggagag
gaagtcgctgtaagaagtacagtgttccagacagccacagtagaagaggaggatgatgga
gtggaggccattgaggaagaattctttcttcagcagggagaaccaccaagagacggtgcc
aagagaggttgcttgatcatgtaa
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