| Entry |
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| Symbol |
vldlr
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| Name |
(RefSeq) very low-density lipoprotein receptor isoform X1
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| KO |
| K20053 | very low-density lipoprotein receptor |
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| Organism |
cgar Clarias gariepinus (North African catfish)
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| Brite |
KEGG Orthology (KO) [BR:cgar00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:cgar04131]
128545650 (vldlr)
Membrane trafficking [BR:cgar04131]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128545650 (vldlr)
|
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| SSDB |
|
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
17:23073192..23097944
|
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| AA seq |
872 aa
MVLCVLGFLFLPLLGFTDGSRIECEQSQFQCGNGRCIPSVWQCDGDVDCTDGSDENTCVT
KTCTDQEFVCRNGQCLPKRWHCDGEPDCEDGSDESMDVCQSRTCRMNEFSCGTGSTLCIP
VSWKCDGERDCDNGEDEASCGNITCSPLEFTCASGRCVSQSFVCNGEDDCGDGTDELDCT
PSSCGPNQFQCGNATCIPVGWMCDNDADCQDQSDESPLRCGRNPTPPAKCSASETQCGSG
ECIHRKWRCDGDADCKDGSDERSCPPRSCRPDQFKCDDGTCIHGSRQCNGFRDCSDGTDE
DNCKNLTQCSGPDKYKCRSGECIEISKICNKVRDCADWSDEPMNECDLNECLVNNGGCSH
LCRDLVVGYECVCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHEGYQMNS
STGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQLVEQLRNTVALDADFNSQRIFWADLG
QKAIFSTALDKREDQNSHTKVVDVQMPVGVAVDWIYKNVYWSDLGSKTIAVTNFNGTKQK
VLFDKDLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLD
LIKSRLYWVDSKLHTLCSVDLNGDNRKKVLQSQDYLAHPFALTVFEDRVFWTDGESEAIY
AANKFTGSDVIMLASNLNEPQDIIVYHELVQLSGTNWCDERVENGGCSYMCLPAPQINKH
SPKYTCMCPEGQELTSDGLQCKPVPSTADPQDEGRVLTHPTHPPDTPKPKVAAQSEPTGK
NLSTSIHEVKSAKGSAAAWAALPLLLLAMTAIGGYVMWRNWQIKNKKSMNFDNPVYLKTT
EEDLNLNIDSQTASVGHTYPAISIVNTEDDMP |
|---|
| NT seq |
2619 nt +upstreamnt +downstreamnt
atggtcctgtgcgtcctgggctttcttttcctgccactgctcgggtttaccgacggctcg
cgaatagaatgtgagcaatcgcagttccagtgtgggaacggccgctgcatcccgtctgtg
tggcagtgtgacggtgacgtggactgcactgacgggagcgatgagaacacgtgtgtgacg
aagacgtgcacggatcaggagtttgtctgccgcaacggccagtgcctccccaaacgatgg
cactgcgacggagaacctgactgcgaagacggctccgacgagagcatggacgtgtgtcag
tccagaacttgccgaatgaacgagttcagctgcggcacaggctcaacgttgtgcattcct
gtctcttggaagtgtgacggagagagagactgtgacaacggagaagacgaggcaagctgc
ggtaacatcacctgctctcctctggaattcacctgtgccagcggccgctgcgtctcccag
agctttgtatgtaacggcgaggatgactgcggcgacggtaccgacgaactggactgcact
ccttcttcctgcggccctaaccagttccagtgcggcaacgcaacgtgcattcctgttggt
tggatgtgcgacaacgacgcagactgtcaggaccaatcggacgagtcgcccctgcgctgt
gggaggaaccccacaccgccggcgaaatgctcagcgagcgagacgcagtgcggctcagga
gagtgtattcaccgcaagtggcgctgtgacggagacgccgactgcaaagatggcagcgac
gagaggagctgtcctcctcgctcctgtcgcccggaccaatttaagtgtgacgacggaacc
tgtatccatggcagccggcagtgcaacggtttccgagactgttcagacggcacggacgaa
gacaactgcaaaaacctgactcagtgtagcggcccggacaagtacaagtgtcggagtgga
gagtgtattgagatcagcaaaatctgtaacaaggtccgtgattgcgccgactggagcgac
gaaccaatgaacgaatgcgatctgaacgagtgcctcgttaacaacgggggatgctcgcac
ctgtgccgtgacttggtcgtcggctacgagtgcgtctgcacgcctgggttgcagctcatc
gatcacaaaacctgtggggatatcaacgagtgcttgaatccggggatctgtagtcagatt
tgcatcaatctgaaaggaggctacaaatgcgagtgccatgagggttatcagatgaattcc
agcacaggagtgtgtaaagcagtaggcaaggagccttgtctgatcttcacaaaccggaga
gacatccggaagctggggctggaaaggcgcgagtatacacagctcgtcgaacaattgcgc
aacaccgtggccctggatgcggactttaactctcagagaatcttctgggccgacctggga
cagaaagccatcttcagcacagcgctagacaagcgtgaagatcagaacagccacaccaaa
gtcgttgatgtccaaatgcctgtaggagtagcggtggactggatatacaagaacgtctac
tggtcagatctgggcagtaagaccatagctgtgaccaatttcaatggcacgaagcagaaa
gtgctgtttgacaaggacttaaaggagccagcttccattgcagtggatcctctctctggg
ttcctttactggtcagactggggcgagccggctaaaatcgagaaatccggaatgaacggg
gtagaccgacaagtcctagttgaaaccgatatccagtggcctaacggtatcacccttgat
ctgatcaaaagtagactttactgggtcgattccaagctgcacacgctgtgtagtgtggat
ctaaatggagataaccggaaaaaagtcctgcagtcccaagattacctggctcaccccttt
gccctcacggtgtttgaggatcgagttttctggacggatggcgagagtgaggctatttat
gcagcaaataagtttacaggatcagatgtgattatgttggccagcaacctgaacgaaccc
caggacattattgtctaccatgaactcgtccagctatccggcaccaactggtgtgacgag
agggtcgaaaacggcggctgttcctacatgtgtctgccggcgcctcaaatcaacaagcac
tctcccaagtatacgtgcatgtgtcccgaaggtcaggagctcacctcggacggcttgcag
tgcaaaccagtgccatctacagctgatccacaagatgaagggcgggtgcttacacacccc
acacatcctccagacaccccgaaacccaaggtcgcagcacagtccgagccgactggaaaa
aatctcagcacttcaatacatgaggtcaaatcagccaaaggatcagctgcagcgtgggca
gctttgccactgttgttgctggccatgactgcaattgggggttatgtaatgtggcggaat
tggcagataaagaataaaaagagcatgaattttgacaatccggtgtacctgaagactacg
gaagaagacctcaacctcaacattgactcacaaactgcatcagtcggtcacacgtatcct
gctatttctatagtaaacacagaagatgacatgccatag |
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