Clarias gariepinus (North African catfish): 128545677
Help
Entry
128545677 CDS
T10780
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128545677 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128545677 (pom121)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128545677 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
128545677
NCBI-ProteinID:
XP_053372162
LinkDB
All DBs
Position
17:12107516..12121854
Genome browser
AA seq
1236 aa
AA seq
DB search
MSPADKRRLAFISLLAIVLLFLVLTCIPAYLYILFFFVVTCVVCYYKAEEFQLFERLGLN
PRCGLTVPTALRRWLPDRTFTGVPAAARNKTRSNKSDVRNSLASPIDRSFAGSVYRRDAT
FSDSVFSPRNILMGSYLSKAESPSGTGRPAGSSGSGGNPREQLRERLIRPNHGVPTPNRR
LSFGEPVGAAGRFTITPQRHYPLQQLGSSPVGVFPPAQWDSFRKKNILTQRNTPVHSPVT
VKIARPDNTIRSPFFDQLNPSETLPSPGCKARADPCSRETVLSVLRANRKRDVDEDDDER
AHEAGQKTKRRRNDSSESSQSVFEPLLANGAPAQLIPKPGSLKRGMNVSTLEESTVKRSR
TSSISSVSGCPVSCGVPGSARNPIRSSYSSSQGYSQRRLASNLSSSPFVSPGSSQSQTPE
RAAKKPREDDETLGNSDSASNTKMATETAPGSGKCTPLPDPPVTPRSDSGGSSGKRKRKI
QLLSMCRSDQISLPPPPELGFPITVKDLDMEKKAALTQIQKVLEEPEPDKPSQAPHSSPA
GPSVGIFSQVASFSSTSAAIVVSANSLAPLTTPAAGLPPAATAVSTPASAPTIDLTLTPS
STVSVAPIQTAVLPTPATSATVAATPVANPLLESLKNMKSSSLISVPLLIAATSAAPATS
VAVQAPSSVTSTALSFGTVKNEPPTATPQPTVSTAPSTMPSAFAQTLALPSLSTALNPAG
GNLFSFTSSAHTTCTASAQPASSTANPTQSGFKPIFAPAMTMAASTAEVKTTQNTFKPIF
ESSFNEPASSTSSVPATQSSMSLFGGVTNTQSSSSSLTSSGPRQNPSQSLFGSQSNSHSV
AAPVSSSSIQNPAPSVFGGLTTSQTMAVSVSSSASNTQNSTQSLFGGLANSQPMTASVLP
SSSNTQNPAQPVFRGLTSSQPMAASISTSSPSTQNSTSLFGRLGAPKSSFQFGGLSSTPA
SSGISTSTTSTSTTNTTLQFGSLKPAPTAPSAAPQNTFAFGQSTATNSFTGFGMATNTTP
MTTSTPATQATFGSSLFSASTGFANPSASSPVKPFAFGASAGGTAVTPLTFGTPASTAAP
TFGNSTQSVFGGASTGFGFGNTSALPVSAASMPAPTFTFGAAAAAATPQNSAASGGFNFT
AALSGAQFGTPTPAGQNQGFSFGAGNTDNKPSFGTSTPAFGTPSGPIPFGSPGTPVGGFG
AANFGTPSASFSIGAGSKPSSSRQRLQARRQHTRKK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgcagataaacggcggctagcttttatctctcttctcgctattgtcctgctt
tttctcgtgttaacgtgcataccagcatatctgtacatacttttcttttttgtcgtaact
tgtgtcgtttgttattataaagcagaggagtttcagcttttcgagaggttgggcctgaat
ccccgctgtgggctgacagttcctaccgctctgcggcgctggttgccggacaggactttc
acaggcgtcccggcggccgcgcggaacaagactcgaagtaataaaagcgatgttagaaat
tctttagcgtctcccatcgacagaagttttgccggctccgtttacaggcgagacgcaacg
ttcagcgactcagtgttcagtcctcggaacatcctcatggggagttatctcagtaaggca
gaaagtccctctggcacagggcggcccgctggatcttcgggctctggcgggaaccccaga
gaacagctccgggagagacttatccgaccaaatcacggagtccctactccaaacagaaga
ttgtcgtttggtgaaccagtgggagctgcagggaggttcaccatcacccctcaaagacat
tatccgctgcagcagttaggatcctctccagtgggtgtctttcccccagctcagtgggac
agcttccgcaagaagaacattctcacccagcgcaatacacccgtacacagtccagttaca
gtgaagatcgcaagaccggacaacacaatacgctcaccattttttgatcagctgaatccc
agtgaaacacttccatccccggggtgtaaagcccgagccgacccctgttctcgagaaact
gtactgagcgtgctcagagcaaatcgtaagcgtgatgttgatgaggatgatgatgagaga
gcgcacgaagcaggacaaaagaccaaaaggaggcggaatgacagcagtgaaagttcccag
tcagtttttgagccactgctggctaatggtgctccagcccagctcataccaaaacctgga
agtttgaaaagaggcatgaatgtctccacgttggaggagtccacagtaaagagatctcga
acctcttccattagctcagttagtggatgtcctgtttcctgtggcgtgcctggatcagct
cgtaaccctattcgtagctcttacagttcctcacagggttactcacagaggagattggca
tctaatctcagttcatctccttttgtaagcccgggatcatcgcaatctcagactcctgag
agggcggctaaaaagcccagggaagatgatgaaactttaggaaattctgattcagccagt
aacaccaagatggctactgagactgcccctggctctggtaaatgcactcctttgcctgat
ccccctgttacacctcggtcagactctggaggaagcagtggcaagcggaaacgtaaaatc
cagctgctgtccatgtgcagaagtgaccagatatctttgcccccaccacctgaactgggc
ttcccaatcactgtaaaggacttggatatggagaaaaaagctgctcttacccagatccag
aaagtccttgaagagcctgagccagacaagccaagccaagcccctcattcatctcctgct
ggtccttctgtaggcatattttcccaggtagcttcattttcctcgacttcagctgccatt
gtagtgagtgctaactcactggcccccctgaccaccccagctgctggtcttccacctgcc
gccactgcagtttctaccccagcttcagcaccaaccattgacctcacacttactccatcc
agcacagtcagtgttgcaccaattcagactgccgtactgcctacacctgctaccagcgcc
actgtagcagctacgccagtggctaatccactactggagtctctgaagaacatgaagagc
agttctctaataagtgttccccttctcatagctgcgacctctgcagctccagcaacatct
gtggcggtccaggctccctcttctgttacctccactgctttaagctttgggactgtaaaa
aatgagccccctactgctactccacagcccacagtgtcaacagcaccttccaccatgccc
tctgcctttgcccagactctggctctaccatcgttatccaccgcactcaaccctgcagga
ggcaacctctttagtttcacttcttctgcacacacaacctgtacagcctctgcacagcct
gctagcagtacagccaatccaacacaatcagggtttaagcctatttttgcgccagctatg
acaatggcagcgtctactgcagaggtcaaaactacacaaaacactttcaagcccattttt
gaaagttcatttaatgagccggcttcttcaacatcctctgtaccagcaactcagagtagc
atgtctctgtttggtggagtcactaatactcaatcttcatcttcctctctcacctcgtca
ggacccagacagaatcctagtcagtctctgtttggaagtcagtctaacagccattcagtg
gctgctcctgtgtccagctccagtatccagaatcctgctccatcagtgtttggtggactg
actaccagccaaacaatggctgtttcagtttcatcctctgcctcaaatacccagaattct
actcagtctctgtttggtggactggccaacagccagccaatgactgcttcagttttgcca
tcctcctcaaatacccagaatcctgctcaacctgtttttcgtggactgaccagcagccaa
cccatggctgcttcaatctcaacatcctcccctagtactcaaaattccacatctcttttt
ggcagactgggtgctccaaagagcagctttcaatttggaggtttgtcatctactcctgct
tcttctggaattagcactagtactacatctactagcaccaccaatacaactttacagttt
ggttctttaaaaccagcaccaactgctccttctgctgctcctcaaaacacattcgccttt
ggccaaagcacagccaccaactctttcacagggtttggtatggccaccaatactaccccg
atgacaacaagcaccccagcgacccaggccacgttcggtagctcattatttagcgcctcc
acaggctttgccaacccttcggcttcttctccagtcaagccttttgcatttggtgccagt
gccggaggaactgcagtcacacccctcacctttggcacacccgctagcacagctgcacca
acgtttggaaattccacacagtctgtatttggtggagcctccactggttttggctttggg
aatacaagtgctttgccagtgagtgctgcctctatgccagcccctaccttcacatttgga
gcagcagcagcagcagccacaccccagaactctgcagcatctggaggcttcaatttcact
gcagcgctttctggagcacagtttggaacgcctacaccagcagggcagaatcaggggttt
tcatttggagcagggaacacggataacaagcccagttttggaacctcaacccctgcattt
ggcactccaagtggccccatcccatttggcagcccaggaactcctgtaggtggattcggt
gccgcaaattttggcactccttcagcctctttttcaattggtgctggatcaaagcccagt
agttcaagacaaagactacaggcccgcaggcagcacacaagaaagaagtaa
DBGET
integrated database retrieval system
