Clarias gariepinus (North African catfish): 128545693
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Entry
128545693 CDS
T10780
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128545693
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128545693
04090 CD molecules [BR:
cgar04090
]
128545693
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
Nectin family
128545693
CD molecules [BR:
cgar04090
]
Proteins
128545693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ig
Ig_3
V-set
Ig_2
I-set
C2-set_2
Amnionless
Psg1
Orf78
Nucleoside_tran
C1-set
DUF6377
TRP
Ctr
Tmemb_9
DUF6548
7TM_GPCR_Srv
Izumo-Ig
LapA_dom
DUF2852
Motif
Other DBs
NCBI-GeneID:
128545693
NCBI-ProteinID:
XP_053372188
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All DBs
Position
17:complement(16682568..16687949)
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AA seq
465 aa
AA seq
DB search
MPCTMQNTHSLYFRLLVLIIGGLTQCLAMKHLTVMRGDTLTLTCRLKKHHTSSPVEWKNP
ENLSLFFNKIKAMKDKRTSLVALTNSKFSIRVTDIKFKDGGVYNCVRYNPEFSEKKFKVT
VIDAPKLEKDEQGDKTIVTCTASANEHPPSLSWLIDNGVEIEALPNYEGDNVTKKYTAVS
HLNVKSTTKRVRVTCLAHHPALYHFYLENSIYLGSQSEDTLSKNPKYPSTTPDTTVITTL
PSSTSEDTSTSSKYPSPTLGTTDTKFISNLFSSTSFTSSHSQSESTDYSNTTVAVAETTE
DISSNDSANVLSNTTANESISETTEGTPSNTSITSSSDNNGNYSSHERQSIKKGNSALLV
LLVTCLIICLFVVLVFFLVRLRKAHIAWKKENEESEQSVESSKSKSSSEEKQKQRRQGFW
NTSFTKYKAEEPLENGAQATSASVQVVNENPQDFISRSGIKETEL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcactatgcagaacacacacagcttatactttcgccttctcgtgttgatcata
ggaggcttaacacagtgtctggctatgaagcatttgacagtaatgcgaggagacacactg
actctgacatgccggctcaaaaaacatcatacaagttctccagttgaatggaaaaaccca
gaaaatctttccttgttctttaacaaaataaaagccatgaaagacaagaggaccagcctt
gttgctttaaccaattcaaaattttcaatacgggtgactgatatcaaattcaaagatgga
ggggtatacaattgtgtacgttacaatcctgaattctcagagaaaaagtttaaagtaact
gtcatagatgctccaaaactggaaaaggatgagcagggcgataaaacaattgttacatgc
actgcttcagcaaatgaacatccacccagcctgtcatggctgatagataatggtgtagag
attgaggctcttccaaattatgaaggggacaatgtaaccaagaaatacacagctgtcagc
catctgaatgtaaaaagtactacgaagagagttagagtaacgtgcctggcccatcatcca
gctctctaccatttctacctggaaaactccatttatttaggaagccagagtgaagataca
ttatcaaagaatccaaaatatcccagtaccacaccagacacaacagttattacaactctt
cctagcagtacaagtgaagatacatcaacctcatcaaaatatcccagtcccacacttgga
acaacagacacaaaattcatttcaaacctttttagcagtacaagcttcaccagtagtcat
tcacagtcagaaagcacagattacagtaatacaacagttgcagtagctgaaaccacagag
gacatttcatcaaatgacagtgcaaacgtattaagcaacactacagcaaatgaatcaata
tctgaaacaacagagggcacaccatcaaataccagcatcacgtcatcaagcgacaataat
ggcaattacagcagtcatgagagacaaagtattaaaaagggaaattcagcattgcttgtg
ttgttggtcacatgcctcatcatctgcctgttcgtggtacttgtcttcttccttgttcgg
ctaaggaaagcacacattgcctggaaaaaagagaacgaagagtctgaacagtcagtggag
agcagcaaatcaaagtctagcagtgaggagaagcaaaaacagaggagacaaggcttttgg
aacaccagtttcacaaagtacaaagcagaggaaccactagagaatggtgctcaggccaca
tctgcttctgtacaagtagtgaacgaaaacccacaggactttatttctagatctggcatc
aaagagactgaactgtga
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