Clarias gariepinus (North African catfish): 128545704
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Entry
128545704 CDS
T10780
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128545704 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128545704 (rsf1b.1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
128545704 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
128545704
NCBI-ProteinID:
XP_053372210
LinkDB
All DBs
Position
17:5725272..5738184
Genome browser
AA seq
1602 aa
AA seq
DB search
MAASAAAAGSSPGLCPSFAVICSFLERYGALLDLPELTFPQLERYLQETATVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKVCQEFNTTWAWELEKKGYREMTVECKTGILKYLCECQF
DDNVKFKIAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRNRNDLAQILELLKTQIDPSLLVKKDQEEGSSSNSPNPDTAENKEKKDDAEPKKDKDLD
EEKSPKTENDDMEIDSVKHENAEGKDALTEKDTKEDVKSDKPVVVEGTITKAVKEEVMED
ESINNISEKNGGALPSEHTEEVKIQKKDMKNDQQAKIPLKKREMKDFDATNCASGGSSII
VRNPAVKEVQSTGGENGLSTENLNGNASPVVAMEGDGRESDTLQIKQKDLQAVSKDQQAD
AEVKETEKQRSDTKQEEGHEEKQKKEAAIMCKRQTSTEESMEVEKTAVSKEEEAAQTTET
SQESVGIHSHAGIDKDSDEAAKMEVAEECLKSLDEEASEKSSVTKATDQAENEKKPETLK
ESPCPNESEMDHKGEDAKDAAKDAAPQMETPMETETSASKDSTKQQSTADRPCTPEETKN
SLNETSSTTLEDCALLEGDKKPGSGSPKQTENQELPRQHETPVKESNESAPLNSVRKLSE
DLDVTKEKEKPSSPKEKTEDCVKSTVCEEKNTESTAKESQDRILDTTTVPASEGDDSVTN
QKESEDQKKQDALEKTKNLPCHAVSKKEEVVNEDGKTDVTLADTKDDKDNEETKQNVSVD
KDPPDAVSKDCDAELQKEKGVLPVQESSKASIEDSNEDQKENSEQKSTLEKEVSLSSEST
DSQNQAIEKEKTSKGEADESKAASEVPQEAIRLKIKVPAHRRRTELQREEGKGDSESEAS
EGRCLRRSPRICRPTAKLAEIQDRKVEKKPVAPSVEKEKEKEKEKEDNEEKEGEENVVQK
KTREKKVDQDGQAKPKGRRQRRVRWSRVRSRRKKKGSEEDEDDEEESSSEAEETEEDDSD
EDYQVEKKKRRRNRNKERNSSDTSTSSSDDLPPNDDPCKHCGLPNHPELILLCDSCDSGY
HTACLRPPLMIIPDGEWFCPPCQHKLLCDKLEEQLQNLDVALKKKERAERRKERLVYVGI
SVENIITPTVETQEEKPEEVVKEKKEVKKNKSCGRRSTRAKKYISYRFDEFDEAIEEAIE
EDIKEAEGGGAGRGKDMANITGHRGKDISTILQEEGKENGKPKRASAGQRRKKRRRLNDL
DSDSTVDEEESEEEFRLSDSSEEEEFVASDNDVDSEGEPQSFDDSDFGSDGQGPMTGFSS
RRKSSTRWSMRPRRRRRPKGYSDDEELEETDEEEEEQIVTEGSSEFSDSDLDMRRRRSHR
SQKKQVNYCEASESDGSQGSTNRDKAKKRRRLSSSESDASFRSMDSDEEDGKGKKLTVLS
EMESRIRRRRLSLKRRRESEDDDNSSDSDDSEEEERPVRKRVNRIDSDDSDEEEKEKKST
EKEAEDTVAKGIGHLDYNMELPPTNGQSPMKTLEGLISRPATGMANPALVSQTGLKNSSA
PQPVSIGANGIAPQEMAPQDEDEDDLLGVTDLVDYVCNSEQL
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcggcagcagcgggttcttcccccgggttgtgcccaagcttcgccgtg
atctgctcttttttagagcgttatggagctttgttagatcttccggagctgacgttcccg
cagctggagcgctatctgcaggaaacggctacagttcctaagctgctggtagaccttcat
gtgaagctgctccggaaaataggcaagtctgtttctgcagaccgatgggagaaatatctg
gtcaaggtctgccaggagttcaacaccacctgggcatgggaactggaaaagaagggatat
cgtgagatgactgtggagtgtaaaactggaatacttaagtacttgtgtgaatgccaattc
gatgacaatgtcaagttcaagattgccatcaatgaagaagaccctgataaaatgcgcctc
cagcccatcggcagagacaaagatggtctcatgtattggttccagcttgaccaggatcac
aatgtgagggtgtatgtggaggagcaggacgatttagatggctcgtcctggaaatgtatt
gttagaaacagaaatgatctggcacagatccttgaactcctaaagacccagattgatccc
tccttactggtcaaaaaggatcaggaggaaggttcatctagtaacagcccgaacccagac
actgcagaaaacaaggagaaaaaggacgatgcagaacctaagaaagacaaggacctggat
gaagagaagtccccaaaaactgaaaatgatgacatggaaattgacagtgtaaagcacgaa
aatgccgaaggaaaagacgcactaacggaaaaggacactaaagaagatgtcaaatctgac
aaaccagttgtagtcgagggaaccattaccaaagcggtgaaagaggaggtcatggaagat
gaatcaatcaacaatatctcagaaaagaatggtggagcattgccttcagaacacacagag
gaggtgaaaatacaaaaaaaagatatgaaaaatgaccaacaagctaagatccctctgaaa
aagcgtgaaatgaaagattttgatgccaccaattgcgcaagcggaggcagcagtatcatc
gtccgtaacccagctgtaaaagaagtgcagagcacgggtggagaaaacggattgagcact
gagaatctaaacgggaatgcctcgcctgttgtagcaatggagggtgacggtcgggagagt
gacaccttgcagataaagcaaaaagatctgcaagctgtttctaaagatcagcaagcagat
gctgaagtcaaggaaacagaaaagcagcgttctgacacaaaacaagaagaaggacatgaa
gaaaagcagaaaaaagaagcagcaataatgtgtaaaaggcagactagcacggaggaatcc
atggaagtggagaaaactgctgtgtcgaaggaagaagaggcagctcaaacaactgaaacg
tcacaagaatctgtagggattcattcgcatgcgggaattgataaggattctgatgaggca
gccaagatggaagttgcagaggaatgtttaaaatctcttgatgaggaagcatctgagaag
tcaagtgtgacaaaagccactgaccaagctgaaaatgagaagaagccagaaacgttaaaa
gaaagtccctgtccaaatgagagcgaaatggatcacaagggagaggacgcaaaggatgcc
gcaaaggatgccgcaccacagatggagactcccatggagactgagacatctgcatcaaaa
gactccacaaaacagcaaagcactgcagacagaccttgtacacctgaagaaaccaaaaat
tctcttaatgaaacatcttctacaactctagaggactgtgccttactggaaggtgataaa
aagcctggatcgggttccccaaagcagacagagaaccaggagctacctagacagcatgaa
accccagttaaggaaagcaatgaatccgcccctttaaatagcgtaaggaaactgagtgaa
gatttagatgttaccaaggagaaggaaaagccatcttcgccaaaagaaaagactgaagac
tgtgtaaaatcaactgtgtgtgaagagaaaaatacagagtccacagccaaagaatctcag
gacaggattttggatactaccaccgtgccagcttcagaaggagacgattctgtaaccaac
caaaaagaatcagaggatcagaagaaacaggatgctcttgaaaagaccaagaaccttcca
tgtcatgcagtatccaaaaaagaggaagtagtgaatgaggatgggaaaacggacgttact
ttagcagacaccaaggatgacaaagataatgaggagacaaaacagaacgtgtcagttgac
aaagatcctcctgatgcggtgtccaaggattgtgatgccgaacttcaaaaggagaaaggt
gtgcttcctgttcaggagagcagcaaggcttctatagaagactccaacgaggaccagaaa
gaaaacagtgaacaaaagagtactttggagaaggaggtaagcctcagcagcgaatcgaca
gactcccagaatcaagcaattgaaaaggagaagacgagtaaaggagaagcagacgagagc
aaagcagcttctgaggtaccgcaagaagcaatccgtctgaaaatcaaggtcccggctcac
agacgcagaacagagctgcaacgggaagaaggaaaaggtgactcagagtctgaagcaagc
gaagggagatgtttaagacgctcgccgaggatttgcagaccaacagccaagctagcagaa
atccaagaccggaaggtggaaaagaaaccggtcgctccttcagtcgagaaggaaaaggag
aaggagaaggagaaagaggacaacgaagaaaaggagggagaagaaaacgtagtgcaaaaa
aagacgagagagaaaaaggttgatcaagacggccaagctaaaccaaaggggagacgccaa
aggcgggtccgatggtccagagttcggtcacgacgcaaaaagaaaggctcggaagaagac
gaggacgatgaggaggagagttcgagtgaggctgaggaaaccgaggaagatgacagcgat
gaggattaccaggtggagaaaaaaaagagaaggaggaaccgcaacaaggagaggaacagc
tctgatacttctacctcgtcttcagatgaccttccaccaaacgatgacccctgcaaacac
tgtggcctgcctaaccaccctgagctgattctgctgtgtgactcgtgtgacagcgggtat
cacacggcgtgtctccggcctcctctcatgatcatccctgatggcgaatggttctgtcca
ccgtgccagcataaactgctttgtgacaagctggaagaacagctacagaatctagatgtg
gcacttaaaaagaaagagcgtgcggagcgaaggaaagagcgtctggtctatgttggaatc
agcgtcgagaacataatcacgccgactgttgaaacacaggaagagaaaccagaagaggtg
gtaaaagagaagaaggaggtcaagaagaacaagtcctgcggcagaagatcaaccagggct
aaaaaatatataagctacaggtttgacgagttcgatgaagctatcgaggaggcgattgaa
gaggatatcaaagaggctgaaggaggaggagcaggccgtggtaaggacatggcgaatatc
acaggccaccgaggaaaggacatttccaccattttgcaagaagaagggaaggaaaatgga
aagcccaagcgcgcaagtgctggacagcgcaggaaaaaacggcggcgtctgaacgacctg
gacagcgacagcaccgtggatgaagaggagagcgaggaagagttccgccttagcgacagc
agtgaggaggaagagtttgtggcgtcggataacgatgtggacagtgagggagaaccgcag
tcattcgacgacagcgactttggcagtgacggccaaggaccgatgacgggcttttcgtcc
agacggaagtcgagtacgcggtggagcatgcgacctcgcaggcgacgcagacccaaagga
tactcggatgatgaggagcttgaggagactgatgaagaggaggaagaacaaattgtgact
gagggttccagtgagtttagtgacagtgacctggacatgcgcaggcgccgttcccaccgg
agccagaaaaagcaggtaaactactgcgaggcgtctgaatcagatggctcccagggaagc
accaacagggacaaggccaagaagcgcagacgcttatcaagctccgagagtgatgcaagc
ttccgctctatggactcggacgaagaagacggaaagggtaaaaagctgacagtcctgtca
gaaatggagtctcgcatacggcgcagacgtctttcgctgaagcgcaggagggagtctgag
gacgatgacaacagcagcgattctgatgattcggaggaagaggaacggcctgtccgtaag
cgggtgaaccggatcgattcggatgacagcgatgaagaggaaaaggagaagaagagcaca
gagaaggaggcagaggacaccgtagcgaaaggcatcggccatctagactataacatggaa
cttcctcctactaatggacagagccccatgaaaactctggagggtttgatctcacggcct
gccactggcatggctaaccccgctctcgtgagtcaaacagggctaaaaaacagcagcgcg
ccacagcccgtgtcgatcggcgcaaatggcatagctccccaggagatggcgccgcaggat
gaggatgaggatgaccttttgggggtcacagaccttgtagactatgtttgcaacagtgaa
cagttgtaa
DBGET
integrated database retrieval system
