Clarias gariepinus (North African catfish): 128545726
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Entry
128545726 CDS
T10780
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128545726 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128545726 (alcama)
04090 CD molecules [BR:
cgar04090
]
128545726 (alcama)
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
Other
128545726 (alcama)
CD molecules [BR:
cgar04090
]
Proteins
128545726 (alcama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_PDGFR_d4
C1-set
Syndecan
DUF6479
Motif
Other DBs
NCBI-GeneID:
128545726
NCBI-ProteinID:
XP_053372243
LinkDB
All DBs
Position
17:complement(14959428..15034705)
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AA seq
571 aa
AA seq
DB search
MRLVFLFGAFLGAAMFPRDQGQYLADDGRASSMEKVIAMYGDTIKVPCNNGDNKPADLMF
TKWKHSSENGTSGDILVKQAQKDEAKITATDTYKTRASIGSDSSLQISHAVLDDQRIFTC
MVVSMSNLNEYPVEVEVHKRPSAPEFRNKASRLDDGKLTPLGECVATGANPPAEIVWVKN
NKSLEADNKLIIISSSITKDSVTGLSTTTSRLQYTAGKQDATSKFACVVKHVTGPDQMSA
PEIFSIHYPTEKVNLQVLSPGSIKEGDDVTLKCQADGNPPPTSFNFHIKGKKVPVTNSDV
YKLPSINRADSGEYKCSLIDNENMQASANITVTYLDLNVIPTGKIQKMVGESLEVKVDKN
SSSEATVVWTKNNVKLDKLPNFSSLTYNNAGFYMCEVSVAGIKRNASFKLDVEGVPVIKS
LRKERSTDGKAKVLVCEVEGSPEPEVSWSVNGTHSQSQYSNGVITYKLTVVPSVNLTVTC
RVSNSLGTATMDIEVPSLHPEKPDSRSDDDEDKAKVIVGVVVGLIVAAALVGVIYWLYMR
SRQGSWKTNEKETGTSEESKKLEENNHRQGV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagttttcctcttcggtgctttccttggtgctgcgatgtttcctcgagatcag
ggacagtatttggctgacgacggaagagcaagcagcatggagaaggtcatcgccatgtac
ggcgacaccatcaaggtgccttgcaacaacggcgacaacaagccagctgatctgatgttc
accaaatggaaacactcaagtgagaacggcacttcaggagacatcttggtgaagcaggcg
cagaaggatgaagcaaagatcacagccacagacacctataagacccgtgctagcatcggg
tctgactccagcctgcaaatcagccacgcagtgctcgatgaccagagaatcttcacctgc
atggtggtctccatgtctaatctcaacgaataccctgttgaagttgaagtgcacaagaga
ccatcagcacctgaattcaggaacaaagcgagtcggctggatgacggcaaactgacgccg
ctgggagagtgtgtagctaccggtgcaaaccccccagcagaaatcgtctgggtgaagaat
aacaagtcgctagaggcagacaacaagcttatcattattagttcctctataacgaaggac
tcagtcactggtttgtccaccaccacctctcggctgcagtacacagcagggaaacaggat
gcaacctcaaagtttgcatgtgttgtaaaacacgtgactggacctgaccagatgtctgca
cctgaaatctttagcatccactaccccactgagaaggtgaacctgcaggttctgtctccg
ggctccattaaggaaggcgatgatgtgacactgaaatgccaagcggatggaaaccctcct
cctaccagcttcaacttccacattaagggtaagaaggtcccggtaaccaactcggacgtc
tacaaactgcccagcataaaccgagctgactccggagaatacaagtgctctctgatcgac
aacgaaaacatgcaggcttcagcaaacatcactgtcacctatctggacctgaacgtcatt
cccactggaaagatccagaaaatggttggggagtccttggaggtaaaggttgacaagaat
tcctcaagtgaagccacagtggtctggactaagaacaacgtcaagctggacaaactaccc
aacttcagctctctaacatacaacaacgcaggtttctacatgtgtgaggtgtctgtagct
ggaatcaaacgcaatgccagcttcaaactggatgtggaaggcgtgcctgtgattaagagt
ctgagaaaagagaggagcacagatggcaaagcaaaggtgttggtctgtgaggttgaggga
tcaccggaacctgaagtgtcctggagtgtcaatggaacccatagccagagccaatacagt
aacggagtaatcacttataaactcaccgtggtgcctagtgtgaacctgaccgtcacctgc
cgggtctctaacagtctagggacagccaccatggacatcgaagtgccatccttacatcca
gagaaaccagattccagatcagatgatgatgaagacaaggccaaggtgatcgtgggtgtg
gtggtgggtctcatcgtggcagctgcactagtgggcgtcatctactggctgtacatgagg
agcagacaaggcagctggaaaacgaacgagaaggagaccgggacctcggaggagagcaag
aagctggaggagaacaaccatagacaaggggtttag
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