Clarias gariepinus (North African catfish): 128545730
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Entry
128545730 CDS
T10780
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128545730 (ddx4)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128545730 (ddx4)
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Other DBs
NCBI-GeneID:
128545730
NCBI-ProteinID:
XP_053372249
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Position
17:20016405..20031822
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AA seq
683 aa
AA seq
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MENWEDDQSPVMSNVNFGNTGNSWKSESQPNSFKSISNDDDDEGSWKNGSSGFGAQGGNM
GRSVREIDGGFKRFNSGNDENGNKVDVGSSWRGGKDGIRGRGGRGRGGRGRGFLGGFGKS
LTSEGDENDDEGFKSDFFGRGGRGGRGGRGASRQVTDAEGRRHFGGGGYRGQHEENMFSK
GSRKDDDGEEEGKENDRTAGPRVTYVPPPPPAEENSIFAHYATGINFDKYDDILVDVSGS
NPPSAIMTFEEAHLCETLNRNVSRAGYVKPTPVQKYGIPIISAGRDLMACAQTGSGKTAA
FLLPILQRLMSDGAAASKFSEVQEPEVIIVAPTRELINQIYLEARKFAYGTCVRPVVVYG
GISTGYTIQEVLKGCNVLCGTPGRLLDIIGRGKVGLSKVRYLVLDEADRMLDMGFETDMR
KLVSSPGMPPKEQRQTLMFSATYPEDIQRLAADFLKENYLFLVVGVVGGACSDIEQLIIQ
VTRYSKREQLLEMLKTTGDERTMVFVETKRSADFIATFLCQEKVPTTSIHGDREQREREK
ALSDFRTGKCPVLVATSVAARGLDIEHVQHVVNFDLPKSIEEYVHRIGRTGRCGNTGRAV
SFFDPEPDAHLARSLVKVLSGAQQEVPSWLEEIAFSAHGTTGFNPHGKVFASTDTRRGGS
FMTQAPQPAAPSNVAGADEDEWE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagaactgggaagatgatcagagccctgtcatgagcaacgtaaattttggaaacact
gggaactcatggaaaagtgagagccaaccaaacagctttaaaagcatctccaatgatgat
gatgatgaaggttcttggaaaaatggcagcagtggttttggagctcaagggggaaacatg
ggtcgcagcgtcagagaaatagatggcggctttaagagattcaattcaggaaatgatgaa
aatggaaacaaagttgatgttggcagctcctggagaggaggtaaagatggaattagagga
agaggaggcagaggacgtggaggaagaggaagaggctttctaggaggatttggaaaatcc
ttgacatctgaaggtgatgaaaatgatgatgaaggttttaaaagtgacttttttggcaga
ggtgggcgtgggggaagaggcggtcgaggagcttcccgccaagttactgatgcagaagga
agaagacactttgggggtggaggatatagaggacagcatgaggagaacatgttttctaag
ggttcaaggaaagatgatgatggtgaggaggagggaaaagagaatgataggactgcaggg
cccagggtcacctatgttcctccgccaccaccagcagaagaaaactctatttttgcccac
tatgcaacaggcatcaactttgacaagtatgatgacatccttgtagatgtaagcggaagc
aacccgcccagtgcaataatgacatttgaagaagcacatctctgtgagactcttaacaga
aatgtttccagagcaggatatgtaaagcctactcctgttcagaagtatggtattcccatc
atatctgctggaagagatcttatggcttgtgcccagactggatctgggaaaacggctgcc
ttcctgctgcctattctgcagcgtctgatgagtgatggtgcagctgctagcaagttcagt
gaggtgcaggagcctgaagtaatcatcgtagctcccactagggagctcattaaccagatt
tacctggaagcccggaaatttgcttatggcacttgtgtgcgtcctgtcgtcgtttatgga
ggcataagcaccggatatacaatccaagaggtgttgaagggttgtaatgtgctatgtggg
acccctggaagattgcttgacattattggtcgtggaaaggttggtctgagtaaagttcgt
tatctggtgctggatgaagctgaccgaatgttggatatggggtttgagactgacatgcga
aagttggtcagttccccggggatgcctccaaaagaacaacggcaaaccctcatgtttagt
gcaacctatccagaggatattcaaaggttggcagctgatttcctaaaggagaattatttg
ttcctggttgtgggagtggtgggaggagcctgtagtgacatagagcagctcatcattcaa
gttactcggtactcaaagagagaacagctgttggagatgctgaagaccacaggggacgag
agaacaatggtctttgttgaaaccaaaagaagtgcagatttcattgcaacgtttctctgt
caggagaaagtgcccactactagcatccatggtgatcgggaacagagagaacgagagaaa
gccctgagtgacttccgcactgggaagtgtcctgtgttggtagcgacttctgtcgctgct
agagggctagacattgagcatgtccagcatgtggtgaactttgacctgccaaaaagcatt
gaagaatatgtgcaccggattggaagaacaggccgatgtggaaacacaggaagagctgtg
tccttttttgacccggagcctgacgctcatctagcccgctctctggtcaaagtcctctct
ggggcccagcaggaagttccttcatggctggaggaaattgcgttcagtgctcatggcacc
accgggttcaacccacatgggaaagtgtttgcctccaccgacactcgcaggggtggatcc
ttcatgacccaggcaccacaaccagctgcaccaagcaatgtggcaggagctgatgaggat
gaatgggagtag
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