Clarias gariepinus (North African catfish): 128545785
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Entry
128545785 CDS
T10780
Symbol
slc27a4
Name
(RefSeq) long-chain fatty acid transport protein 4
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03320
PPAR signaling pathway
cgar04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128545785 (slc27a4)
09158 Development and regeneration
04382 Cornified envelope formation
128545785 (slc27a4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128545785 (slc27a4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128545785 (slc27a4)
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128545785 (slc27a4)
Transporters [BR:
cgar02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
128545785 (slc27a4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
128545785
NCBI-ProteinID:
XP_053372396
LinkDB
All DBs
Position
17:complement(30006185..30025208)
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AA seq
643 aa
AA seq
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MLRLACTTVLLFVLRLVLALPWFQVLPASLIFFLGTGGWHSLRVFMKTIGRDLHAAMVLL
KVKLNVKRHLRQRNTIPKIFAETLQKYGDKTALIFEGTGERWSFRELDEYSNRVANLLHE
RGFREGDVVALFMENRSQYVGLWLGMAKIGIEAALINFNLRLEALVHCVHISNAKAVVFG
SELTDAMSEVHSSMGKSVKLFCSGDWDPKRVPQGTEQLEPLLQAAPTHKPTPPQRGFTDR
LFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFRMRSDDVMYDCLPLYHSAGNIVGVGQ
CLIHGMTVVIKRKFSASRFWDDCSKYNCTIVQYIGEICRYLLNQPVRDVEKRHRVRMALG
NGLRQSIWEEFIQRFNVPQIAEFYGATECNCSLGNFDSKTGACGFNSRILPFVYPIRLVR
VNEETMELIRGPDGVCIPCGPGEPGQLVGRIIQNDPLRRFDGYVNESATNKKIAQSVFKK
GDSAYLSGDVLVMDECGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVE
VPGAEGKAGMAAIADPDQTSDLGKFSRELEKALPPYARPVFLRFLPEVNKTGTFKFQKTE
LRREGFDPNVVSDKLYFLDCTRGCYVELNAELHRSIASGKQKV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggctggcgtgtaccaccgtcctgctcttcgtgctcaggctggtcctggctctg
ccctggtttcaggttctccctgcctccctcatcttcttcctgggaaccggaggatggcac
tcgctgcgtgtgttcatgaagaccatcggccgagacctgcacgccgccatggtgctgctg
aaggtgaaactgaacgtgaagcgacacctgcgccagcgtaacaccatccccaagatcttc
gccgagacgctacagaagtacggcgacaagacggcgctgatcttcgagggcacgggcgag
cgctggagcttcagggagctggacgagtactcgaaccgcgtggccaacctgctacacgag
cgcggcttcagggagggcgacgtggtggctctgttcatggagaaccgctctcagtacgtg
ggtctctggctgggcatggccaagatcggcatcgaggcggcgctcatcaacttcaacctg
cgtctggaggccctggtgcactgcgtccacatctccaacgccaaagccgtggtgttcggc
agcgagctgaccgacgcgatgtctgaggtccacagctccatggggaaaagcgtaaagctc
ttctgttcaggtgactgggatcccaaacgagtgcctcagggaaccgagcagttagagccc
ctcctccaggccgcgcccacgcacaagcccacccccccacagcgcggcttcaccgatcgg
ctcttttacatttacacatctggaacaactggaatgccgaaagctgcgatcgtcgtccac
agccggtattaccgtatggctgctctggtgtattacggtttcaggatgcggtcagacgac
gtgatgtacgactgtctccctctttatcactcagcagggaacattgtgggcgtcggtcag
tgtctgatccatggcatgactgtcgtcatcaagaggaagttctcagcgtccaggttctgg
gatgactgcagtaaatacaactgcacgatcgtgcagtatatcggtgagatctgtcgttac
ttgttgaatcagccggtgcgggatgtggagaagcgtcaccgcgtgcgcatggcgctggga
aacggtctgcgtcagtccatctgggaggagttcatccagcgctttaacgtcccgcagatc
gccgagttctacggcgccaccgagtgtaactgcagcctcggcaacttcgatagcaagacc
ggtgcgtgtggctttaacagccgcatcctgcccttcgtctaccccatccgtctggtcaga
gtgaacgaggagaccatggagctcatcaggggacctgacggagtgtgtatcccgtgtggt
ccaggtgagccgggtcagctcgtgggcagaatcatccagaacgaccccctgaggcgcttc
gacggctacgttaacgaatccgccaccaataaaaagatcgcccagagcgtctttaagaaa
ggggacagcgcctacctgtcaggagacgtgctggtgatggacgagtgcggctacatgtac
ttcagagaccgtacgggagacaccttccgctggaagggtgagaacgtctccaccaccgag
gtggagggaacgctgagccgactgctggacatgaaggacgtggtggtgtacggtgtggag
gttccaggcgctgagggtaaagccggcatggcggccatcgcagacccggatcaaacctcg
gacctgggaaagttcagcagggagctggagaaggcgctgcccccttacgcccgcccggtg
ttcctgcgcttcctgcctgaggtcaacaagacaggaaccttcaagttccagaagacggag
ctacgccgcgagggattcgacccgaacgtggtgtccgataagctctacttcctggactgc
actagaggatgctacgtggagctgaacgccgaacttcaccgcagcatcgcctcggggaaa
caaaaagtataa
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