Clarias gariepinus (North African catfish): 128545800
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Entry
128545800 CDS
T10780
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2 isoform X1
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgar01001
]
128545800 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128545800 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128545800 (lrrk2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128545800 (lrrk2)
Protein kinases [BR:
cgar01001
]
Serine/threonine kinases: TKL group
LRRK family
128545800 (lrrk2)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
128545800 (lrrk2)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128545800 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
COR
Roc
Ras
LRR_14
LRR_13
NACHT
Beta-prop_EML_2
AAA_22
nSTAND3
Arf
AAA_16
Viral_helicase1
PduV-EutP
LRR_6
G-alpha
T2SSE
WDR55
Septin
Gtr1_RagA
MMR_HSR1
TsaE
ABC_tran
AAA_7
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
128545800
NCBI-ProteinID:
XP_053372427
LinkDB
All DBs
Position
2:22928632..22962638
Genome browser
AA seq
2521 aa
AA seq
DB search
MVDKEDLEKNLKKLLVRLRNNLEEVKQLGTMVQIIQDMLFLTYTDECGELFQDKDVHEPL
MLLLSSCSNSKLQQVGWSLLCRLMEICPTTLNKLVQPRQALKDLKALGVDQQILNMLALH
QKDLNVLMVGLKALALMLKSDELTLLILEQEMDVFELVVEAMKTFPHSEELQLQGCSALC
LLLERVPEVHRVEFIERKDHVVVLNVLIRFKDSEKVVLSALQLLLPLAEPASNVEILMSK
SEKCYSVVCQAVEMFSHSEAVQEVGCCLLRKFTSESYFNILVLNGVHRVAMKACLSYPDN
AKIQAAALSCLAALTKTILENEDLKKSCYEGDRGKEYAVDNNKEERLDWKETCCTALDRH
SENAEVQEAACWALNNLLLYGSARSIYEESKERPPVYIQVMTVMLVHSSSFGVFQAAAST
LCTLIRRHSKMRSRLLASGIHYNVVDLMKRHANSSEVCESACRLLYTLFQGGRSVGLDEA
STALSQILIAMKDHNFQPEVQLEGLRASLVLVNPDLSLRENGVSVADPDSIVALRVLKAQ
CVVEEAHTVYLQALNRFISSEDIQECGFAVLSALADCSGAVDVICQQGAIDTVLHTLQLF
PQKSKIHYWGLSLLFQLISKKKLSRTTVPVLASVLVASVRQHKGSREMRLKGFQVIWKLL
DTCSEAAAQLEKEGFEKEIFQQLKESLSSPDHRYDLKLSCLCLSKMVVNSEIHYRLLERA
CEEGDVVMAECLIELGTDVNKKSKTESLIYQVCERGGPLALIEVLVNSGVHEQQLRGVLS
VCVRRRDGPVVVLLLARLGLDPTNSALCLGGFRLGHLEATWLSALLTECRDPPATQKRNS
KGQWLARQIQFLQTKSQMSFLSLVSTSEYFSDDESDDSYYNLEESVFFEDMESDVSDSAP
SGRSYCESPDELTGRSRQQERAKHSVSEGSNADPDLNNSFKGRLACRKDITQRGLVFSAG
GSLSNVDRDHIRLLDLSGNELDSLSCLMDDGAVQEQLVHVLRLDLSSNNLVEFPSALCQS
LRRLTRLDLQGNQLHSLPAELWSLPSLSMLNVSRNCVGRELCLNPRVCCPTLRQLNLSFN
HITVFPYNLSQVMMYLEELSLEGNQLSELSLPLCLTEMKVFDVSKNRLTMISDDFLSACT
KLETFNASVNCLSCLLQLPAKITTLKLAQNNFESVPESIMNLPNLRSVDMRSNSIRVLPG
PTAWASANLRELIFSENQISVLDLKEPVHKWIRLEKLHLSDNKLTELPRQIGLLEELTSL
DVSGNTRLRSFPDEMGKLVRLWDLPLDRLQLQLDLKHIGNKTKDIVRHFQHRLKKAVPYF
RMKLIVVGNAGSGKTTLIQQLMKLKYSQWYYNTQSSTITIRDWSIRDRDRKNMVLNVWDF
AGGNEYGGPHSQFMSPRAIYLVLYDLSKGVSELDAIRPWLFNIKAHAPVSPVILIGTHLD
LCEDGLVQECAHKIQEEVLSQPLFPTIRERHMLCAYEESDSISRLRKAIIREANGFKIQG
QPVMGQLVPDCYVELEQRILQERCRVPVEFPVLRHQCLLQLIEESQLLLEEGELAHAVRF
LSETGVLLHFDDPALQLKDLYFIDPQWLCNAITQLLTHKSLREKPRGVMEHSVVEKVLSE
SSCFPKGHIMHYFKLLEKFQVALPLGDGQLLMHCSLSEHKPVIEIPHCEKSEIIVRVYEM
PYFPMGFWSKLISQLLEVSSLMLRGREKALRPNRIYWRTGIYLNWSSEAYYLVEAFTDVN
SPARFVRITVPCSRKGHVLLGQVVDHIDSVLEEWFPGLLNTDIQGDGETLLKRWALYSFG
DAQDWNKMLLQDLLKHTDKNGLMVNPEDPRCTIPTSQISPDLMLSDQPASIMLDPEELEM
DLSKEYLLGNGGFGSVYRAIYKNEDVAVKIFNMHASELYVHRLIRQELAVLGRLHHPSLV
DLLATGTSPHVLVMELAPSGSLDSLFEHENCSLNRKLQHRIALQVADGLRYLHSSMIIYR
DLKPHNVLLFNLKADSEIIAKLTDYGIAQYCCSMGVKSSEGTPGFRAPEVARGNVIYNVQ
ADVYSFGLLLYDLMTCGKRISDGLKFPSEFDEIAVQGKLLDPVKHYKLSPWPGFQNLMKE
CLREYPESRPTSAQVFDCLNSGKMLCLISELTLPRLSSECFTVSCPSGGLDGGVNGGAGT
HVWLGGGSSSQKHGFVTCVDIETEKWSTQRIDQSPVLSLVTVKVPGEVHEWLVAGTQSGS
LVVMDTRNITVLHCLQSAKDSVTSLFFHTPSQRSSLKSYLLVGTANGMLAIYEDSVIKCV
DGAPVKLVQVGNVNTPLMCLAPSGHHQDRTTLWAGCGMRVFSLTVDYDISKNIDTSQQRL
ASSEACISRLVVEKYVYLSKNRGHSIEVWDKKSGKMIDFIDCLQLLRKVRAVSADSSREI
DSMWAHVKALLVQHNGTLWVGTGSGHILLVDLSTRQLLQVINPGCNSVRAMAPVLIETQG
QKSVILMLGRCVHSSREKLKSHSDAVLMMWSSTLSQEVKDLNRHCELREQMAYNMQGQAH
D
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaaggaggatttggaaaaaaacctgaaaaagctgcttgtgcggctaaggaac
aatttagaagaggtaaagcagctgggcaccatggtccagatcatccaggacatgcttttt
ctgacatacacagacgaatgtggagagctgtttcaagacaaagatgtccatgagccactg
atgctcctgctgtcatcttgcagcaacagtaaacttcagcaggtgggatggtccctgctg
tgccggttgatggaaatctgtcccaccaccttgaacaaactggtccagccccgtcaggct
ctaaaggatctcaaggctttaggagtggatcagcagattttaaacatgctggctttgcat
cagaaagacctaaacgtgctaatggtagggttgaaagccctagccttgatgttgaaatca
gatgagctgacattgctgattctagagcaggagatggatgtgtttgagctggtggtggag
gccatgaagacatttcctcacagtgaggagctgcagctccagggctgctccgcgctttgc
ttgctgctggagagagttccagaggtacatcgagtggagtttattgagaggaaggatcat
gtcgtagttttgaatgtgctcatcaggttcaaggacagtgagaaagtggtgttgtctgca
ctgcagcttctcttaccattggctgagcctgcaagcaatgtggaaattctgatgtccaaa
tcagaaaaatgctatagtgtagtgtgtcaagcagtggagatgttctctcattcagaggct
gtacaggaggtcggatgctgcctactgcggaaatttacttcagaaagttacttcaatatc
ttggtgctgaatggtgtacacagagtggcaatgaaagcatgtctctcctatcctgacaat
gccaagatccaagctgctgcactgtcctgtctggctgcactcacaaagacaatcctggag
aatgaagatcttaaaaagtcatgttatgaaggtgatagggggaaagaatatgctgtggac
aataacaaggaggaacgcctggattggaaagagacttgctgcacagctttagacagacac
agtgaaaatgctgaagtgcaggaggctgcttgctgggcattaaacaacttgctgctctat
ggcagtgcacgcagtatatatgaggaatccaaggaaagacctccggtatatatacaggta
atgaccgtgatgcttgtccactcctcgagttttggtgtgttccaggctgctgcatctacc
ctatgcacgctcatacgccgtcacagtaagatgaggtcccggctcctggccagtggcatt
cattacaacgttgtggatctgatgaagagacatgccaactccagtgaagtgtgtgagagt
gcctgcaggcttctatacacactttttcagggaggcaggagtgtgggtctggatgaagct
tccacggctctaagtcagattttgattgccatgaaagatcataacttccagcctgaggta
cagttggaagggctaagagccagcctggtgcttgttaatccagacctcagtttgagggag
aacggtgtatccgtagcagatcccgactcaattgtggctctgagagtgttaaaagctcag
tgtgtggtagaggaagctcatactgtctaccttcaagccttaaacaggttcatcagcagc
gaggacatccaggaatgtgggtttgctgttctatctgcactggctgattgttctggagct
gttgatgtaatctgccagcagggggcaatagacacagtgttgcacacactacagctgttt
cctcagaaaagcaagattcactactggggtctcagcctcctgtttcagctcatctcaaaa
aagaagctgtcacgcacgactgtgcctgtgttggcgtctgttctcgtcgcctcagtaagg
cagcacaagggcagtcgagagatgcggctaaaaggttttcaggtgatatggaaattgttg
gacacctgctcagaagcagcggcccagctggagaaagaaggctttgagaaagagatcttc
cagcaactgaaggaaagcctctcctctcccgatcacagatatgatctaaagctaagctgc
ctgtgtctgtcaaagatggtggtgaacagtgagatccactaccgcttgctggagagagcc
tgtgaggagggggatgtcgtcatggccgagtgtcttatagagctgggaactgacgtgaac
aagaaaagcaaaacagaatctttgatatatcaggtatgtgagcgcggagggccgctagct
ctgattgaggtcctggtcaacagtggggtgcacgagcaacagttgcgtggggttctgagt
gtgtgtgtaaggaggagagacgggcctgtggtcgtccttttgctagctcgtcttgggctg
gaccccaccaacagcgccctctgcttaggaggcttcagacttggccatctcgaggccacg
tggctcagtgcactgctaacagaatgcagagatccacctgctacacagaagaggaatagt
aaagggcagtggctggcaaggcaaatacagtttctgcagacgaagagtcagatgagtttt
ttgagtcttgtgagcacatcagaatatttctctgatgatgagagcgatgattcctattac
aatctggaggaaagtgtgttttttgaagacatggagagtgatgtaagtgatagtgctcct
tcaggaagatcctactgtgagtcacctgatgaattgacagggcgctctaggcagcaggag
cgagccaaacattctgtttctgagggtagcaatgctgaccctgatctcaataattccttt
aaagggagactggcatgtagaaaagacataacccaaagaggactggtgttttctgcagga
ggttcattgtcaaatgtggacagagatcatatcagactgctagatctgtcaggcaatgag
ctagactctctctcatgcttgatggatgatggtgctgtccaagaacagcttgtacatgta
ctacgtctggatttaagtagcaacaaccttgttgagtttcccagcgctctctgtcagagc
ttgcgacgcctcactcgactggatcttcaaggcaatcaattgcactcactccccgctgaa
ctgtggagtctgccctcattaagcatgctgaatgtgtcacgaaactgtgttggccgtgag
ctctgtttgaacccacgtgtgtgctgtccaactctccgccagctgaacctttcatttaac
cacatcactgtttttccatacaatctcagccaagtcatgatgtatctagaagaactctca
ctagagggcaatcaactctcagagctctccttacccctctgtcttactgaaatgaaagtg
tttgatgtttcaaagaatcgattaacaatgatctctgatgactttttgtctgcatgcacc
aagctggaaacattcaatgcctcagtgaattgtcttagttgtttgttgcaacttccagct
aaaataacaacattaaaattagcccagaacaactttgagagtgttcccgaatcaattatg
aatctacccaatttgcgatcagtggacatgaggagtaacagtatccgagtccttccaggt
ccaactgcctgggctagtgctaatttaagagagctgatattcagcgaaaaccagatttct
gtgctggacctcaaagaacccgtgcataagtggatccgtttggagaaactgcatctaagt
gacaacaagctcactgagcttcctcgtcagattgggctgctggaggaactgacctctttg
gatgtcagtggtaacaccagactgcgctctttccctgacgagatgggaaagctggttcgg
ctgtgggatttgcccttggacagactacagctacaactggacctcaaacacattggtaac
aagaccaaagacattgtcaggcactttcagcatcgtctgaagaaggctgttccatatttc
cgtatgaagctaatagtagtggggaatgctggaagtgggaagaccactctgatccagcag
ctgatgaagcttaagtattctcaatggtactataacacacagtcttcaaccattaccatt
agagactggagcatcagagacagagataggaagaacatggtcctgaatgtgtgggacttc
gcaggtggaaacgaatacggtggcccccattctcaattcatgagtcccagagctatctac
ttggtgctgtatgacctgagtaaaggagtcagtgagctggacgccatcagaccctggctg
ttcaatatcaaagcgcatgcccctgtctctcctgtgattctgattggcacccatctggac
ttatgtgaggatggcctggtacaggagtgtgcacataagatccaggaggaggtgttgtcc
cagccgctttttccaacaattagggagcgccacatgctgtgtgcttatgaggagtcggac
tccataagcagattgcgcaaggccatcatcagagaggccaatggttttaagatccagggg
cagccagtgatggggcagctagttccagactgttatgttgagctggagcagaggattcta
caggagcgttgtcgtgtgcctgttgagtttcctgtgctcagacaccaatgcctcctgcag
ctcattgaggaaagccagctactgctggaggagggagaacttgcacacgcagttcgattt
ctcagtgagactggtgtgctcctgcactttgatgacccagcactgcaactcaaagacttg
tattttattgatccacagtggctctgcaatgccatcacacagcttctgactcacaagagc
ctgcgtgagaaacccagaggtgtgatggagcactcagtagtggagaaggttctcagtgag
agcagctgcttcccaaaaggtcacataatgcactacttcaaactcctggaaaagttccaa
gttgccttgccattgggagatgggcagctcctgatgcactgcagcctgtctgaacataag
ccagtgattgagattcctcactgtgagaaatcagagatcattgtgagagtatatgagatg
ccttatttccctatgggcttttggtccaaactgatcagccagcttctggaggtctcctcg
ttaatgctccggggtagagagaaagctttgaggccgaatcgaatttactggaggacaggt
atatacctgaactggtcttctgaggcatactacctagtggaagccttcacagatgtgaac
agccctgccagatttgttaggatcactgtgccttgctctcgtaaaggtcatgttctgtta
ggccaggtggtggatcatattgactctgtgctggaggaatggtttcctggcctcctcaac
actgatatacaaggtgatggggagacgctgctgaagaggtgggcattgtacagcttcggt
gatgcacaggactggaataagatgctgctgcaggatctgctcaaacacacagataaaaat
ggtttaatggtgaacccagaggaccctcgctgtacaatccccacttcccagatcagccct
gacctcatgctgagtgaccagccagctagtatcatgttggaccctgaggagctagaaatg
gatctttccaaagagtacctgcttggaaatggaggctttggctcagtgtatagagcaata
tacaaaaatgaagatgttgctgtgaagattttcaacatgcatgcatctgagctctatgtt
catagattaatcagacaggagttggcagtattaggtagattgcaccatcccagtctggtg
gatctcctggctacaggaacctctccacacgtgctggtgatggaactggctccatccggt
tctctcgactcactgttcgaacatgagaactgtagcctgaatcgcaaactgcagcacagg
atcgcactacaggtggccgatggtctcagatatttgcactcttcaatgataatctaccgg
gacttgaaaccccacaatgtgctgctgttcaaccttaaagctgactctgagataatagct
aagcttactgactatggcatcgctcagtactgctgcagtatgggagtcaagagctctgaa
ggcactccaggtttcagagcaccagaggttgctcgtggtaacgtgatctataacgttcag
gcagatgtttattcctttggactgctactgtatgatcttatgacttgtggaaagagaata
tcagatggtctaaagttccccagcgagtttgatgaaattgccgtgcagggcaagctacta
gacccagtgaaacactacaaattgtcaccctggccagggtttcaaaacctaatgaaggag
tgtctgagagagtacccagagagcagacctacatctgcacaggtgtttgactgtctgaac
tcaggaaagatgctgtgtctgataagtgagctgactctgcctaggctgtcctctgagtgt
ttcactgtctcctgtccgagtggaggtttggacggaggtgtaaatggtggtgctggaact
catgtgtggcttggaggtggcagtagcagccagaagcatggctttgtcacgtgtgtggat
atagagacagagaaatggtccacacagaggattgatcaaagccccgtcctctcccttgtg
actgtgaaagtgcctggagaggtccatgagtggttagttgcaggaacgcagagtggctca
ctggttgttatggacacgaggaacattacagtgttgcattgtttacagagtgcaaaggac
tcagtgacctcactgttcttccacacaccttctcaacgcagcagcttaaagagctactta
ttagtaggaacagcaaatggaatgcttgctatttatgaagattcagttataaagtgtgtg
gatggtgctccagttaagcttgtgcaggttgggaatgtcaacacacccctgatgtgtcta
gctccatctggccaccatcaggaccgtaccactctgtgggctggctgtggcatgagggtg
ttctctctaactgtggactatgacatctctaaaaatattgacaccagtcagcagcgtctg
gccagcagtgaggcatgtatttctcggctagtcgttgagaaatatgtgtatctgagcaaa
aatagaggacacagtatagaggtgtgggataagaagagtgggaagatgattgactttatc
gactgtctgcagttactcagaaaggtcagagctgtgagtgctgacagttccagagaaata
gactcaatgtgggctcatgtgaaggctttgctggtacagcataatggcacgctctgggta
ggtactggatcggggcacatcctgctggtggatctgtctactcgtcagctactacaggtc
atcaaccctggctgtaattcagtgcgcgcaatggcccctgtgctgatcgaaacacaaggc
caaaaaagtgtgattctgatgttgggaagatgtgttcactcttctcgtgagaagctcaag
tctcattcagatgctgtgttgatgatgtggagtagtaccctgtcacaggaagtaaaagat
ctaaacagacactgtgagctgagagagcagatggcatacaatatgcaaggacaggcccat
gactaa
DBGET
integrated database retrieval system
