Clarias gariepinus (North African catfish): 128545809
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Entry
128545809 CDS
T10780
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04512
ECM-receptor interaction
cgar04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128545809 (frem2a)
04518 Integrin signaling
128545809 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cgar04091
]
128545809 (frem2a)
Lectins [BR:
cgar04091
]
C-Type lectins
Lecticans
128545809 (frem2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
128545809
NCBI-ProteinID:
XP_053372433
LinkDB
All DBs
Position
17
Genome browser
AA seq
3105 aa
AA seq
DB search
MMELYLWLVLLASVAGSYSYARDSHGLSYAHRSALSEDSILVANNRIRVPFGRSVFIDPI
NDLVIEVQPGDRCSLIVLDNDPLSQRPGHLSPKKFPCEFGPNDVKYSHLGSRSPAEDRVR
LQLRYDTQTETVIIPFMLEIEVLFTQLEIVTKNMPLTVDKLHGISNSIDRRILEFKYDRD
SEQCEVTSLSTSSALPRYGEVIDKSKLEKMMDCDAFLKADIRYKHTSIQKSPNRDYIPMV
VELRNKENNLLKQEFFHIMIRIREGLLNHPPKPSFVAMMMMEIDQFVMTALTPDMLAAED
AESDPDDLIFNITTPFSFEEGYIVSTDDRNLPITSFYQRDVKDLKIAYKPPSMDSDTERI
FQIEFEVLDTDGGVSEPFAFMIVVKPMNTLAPVVTKNTGQLLYEGQSRPLFTQNNLEISD
EDNLESVRITVVNGLRHGDLTILGSSTNFFTPADLQVGIVVYQHDGSDTYSDNIIFRMTD
GKNEVEFLFPISIVPTDDEPPIINANTGLVVFKHQIIPISPLMLSAADIDSEDSTIKFTI
EPPHSTVGEVLLRQSEAPEDPSSWKFNMEDGLYEKVVTEWQQKDITDGKLFYRHTGPHIT
EPVSDQFIFKVQDDADPPNQSDENTFFIRILPIDDVPPVLFLGTSLQMTVHEYQMTSFNK
NVLRYTDLDSDDRDLKYIITQPPTDTDESRPVRFGSIVLTEHPNTEVREFTQAQVNHHKI
SYNPPDIELGITTHVAQFHFTVEDTAGNSVKGICTILVQPVNNKPPEITNTGFTVFERGM
HILTNAELDTTDLDTDSKQISFTLSQIPQHGQVQLSFADLVKGRSFSLQDISEGRISYVH
NGDETTSDAFKLDVSDGVHIVPVTVRITVKPVDDEMPTLTLTAGILGSHLSVLENGAAEI
TVSIIQGKDEDTDDLRLTFIVENAPLYGEIMVNGIPSNMFTQADIINGLVTYTHSSGEIG
LFSKQDHFNLTLTDMSDEWAVGGNKITGVSVHVSILPVDNQAPIVKVVPTFSVTEGDKNT
IGDHQIIVDDADTPTEDILCTIVVQPNSGYMENVSPAPGSEKSRSGTAISAFSIRDIKAG
HIHYVQSIHKGVEPVEDRFTFRCSDGVNFSERQFFPIVIIPTNDEKPKIFAREFVVMEGM
NVIIDTPILNGVDGDIPAEDLTFIISEPPKHGFILDQLITGSLPVTNFTLEQIKEASSII
YEHDDSETTEDKFNVILTDGKHKVEGTVKIMIIAVDDETPRLAINDGLEIEIGGTKEIDN
KILKATDLDTEDSTLTFIIRYGPGQGILQKKTDQGSLQNITVGMNFTQMELDQGLIFYTH
SGQEGIRDLIKFDVTDGSNPLIDRYFYITVSNIDAVFPEVVSKGVSLKEGGSVMLTTDLL
RTSDLNSPDENLVFTITRAPVRGHLESTDTPGMPIVSFTQLQLAGSKIYYIHTSDDEIKM
DSFEFEVTDGYNPVFRTFRISIVDVDNKKPVLTVHELRVSEGQSKLITPFELTVEDQDTA
EEFLKFTVTRLPNHGKLLYNDSRPITSFTKQDLNENLISYKHDGTESSQDSFFFTVTDGT
HTDFYVFPDTVFETHRPQAMKIIISLIDNGVPQIVVNKGAQTLKVLPTSHLGYPITSKVL
KAEDRDSSPETLVFHITTQAEHGYLINLQKGNDSINTFTQVNINDQQIYYVLKDKTNATS
DNFIFYVEDNGGNKMKEQHFHLDWAWISLQNQNYVVDEQAGVLEVVLRRRGYLGETSFVG
IGTLDGSAQKNKDFRGKFQKQVQFNPGQTTATWRIKILSDGTYEQSETFSITLSEPVMGV
LESPSVATVEIVDPGDESTVFIPQARIVVEEDIGELLVPLHRRGDVSEELMVLCYTLQGS
ATGTVPSTVLSFSDYISRPEGQTSIVRFKKEETEKLCRVVIIDDSLYEPEESFNVSLSVV
LGGRLGSEYPSTHISILPDMDDAPVFYFGGAEYHVEESQGHIDVQVWRTGTDLSKTATVT
VRSRKTDPVSAEAGVDYVGISKNLDFAPGVNMQTIRVTILDDLGQPLLEGAEKFELILRL
PSNAILGDPAKATVLINDSISDLPKMQFKHHLLTGEESDRRLTAVVQRSGDITHQSTVRC
YTRQGSAQVASDFEERPNTDASVITFLPGDTEKSCVLTLVDDSVYEEEEEMRLVLGSATS
DSPYGASVGTRNETFVKIKDSADKPIIRFAETKLSVTEPKESGKISTVRIHVLRVGDASK
VSVVRVHTKDGSAVSGEDYHPISQDVEFKEGEREHFVEVEVLFDGAREMREAFTVHLKPD
ENMVAEIQRSKAIVYIEETNSMADVTFPSLPHVVSLLHYDEVRRTTHNARPPAGYPVVCV
TACNPRHPEFEKTGSICASEHINDTLTHYRWLVSAPTGADGVTSPMREVDIDTFFTSSKI
ITLDSIYFQAGSRVQCAARAVNSDGDEGLELSSPIVSISTEEGMCHPHKVGTVGAEPFSA
KLQYTGSEDPEHANLIKLSVTMPHTDGMLPVLSTRALSNFELTLSPDGSRVGNHRCSNLL
DFDEVPTRHGFLTKATKNAEQVGGSAPYQYNSTMRGLNTLRFYRNLNLEACLWEFVSYYD
MSELLTDCGGSIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGTSGWQHFDLQSELRLTF
VYDTAILWKDGIGSPPQAELQGALYPASMRINDVGRLVVNFRTKAHFRGLFVASHHASSL
TSVVISTAHPGLTFNLSLVRTEPTYNQPVQQWTFTSDFAVRDYSGTYTVKLIPCTTALNI
EYSVPAVCDPREPVMFDLDIRFQQVSDPVAVEFNLNTQMFLLSKRSVWLSDGSMGFGQES
DAAFSKGDTIYGRVMVDPVQNLGNSFHCNIEKVYLCTGADGYVPKYNPTKSEFGCLADSP
SLLYRFKIIDKAQPETQALRFGDINFNAVLAADDPSALSLVKQPGSDGFRLDSDALFQVT
AGREWYIHTIYTVRSRENANRGIGKRSAEHHSFVAHNSRARRSNQDVPAIAETISAEHNR
GTNIMHIALEHQQAAQTGEIPAESLVQREMDRHGSEKEAVMAAGVSVGLLLFGLIVAVLF
LILRSQSRPEEEVRKRSEKEGLATSGSMQPVMLRSGFEGSDGSEV
NT seq
9318 nt
NT seq
+upstream
nt +downstream
nt
atgatggaactctatctgtggcttgttctcttggcatcagtggcaggtagttatagttat
gcgcgcgactctcatggactgtcgtatgcgcacagatcagcgctctcagaagactcgata
cttgtagcgaacaacaggatacgcgtccccttcgggagatcggttttcattgatcccatc
aacgatctggtgattgaagtgcagccgggagacaggtgcagcttaatagtgctggataat
gatccgctctcccaacgaccggggcatctttcccccaaaaagttcccgtgtgaattcgga
ccgaacgatgtgaaatactcgcatttgggctccaggagccccgccgaggacagagtgcga
ctgcagctcaggtacgatactcaaactgaaaccgtcatcataccgttcatgctggagatc
gaggtccttttcacacaactggagatagttactaaaaatatgcctctgactgtagataaa
ctccatggcattagcaattcaattgacagaagaatactggaatttaaatatgatcgagac
tctgagcagtgcgaggtcacatcactgtctactagcagtgcactgcctagatatggcgaa
gtcattgataagagtaaattagagaaaatgatggactgtgatgcttttctcaaagctgat
attcgctataagcatacttctattcaaaagtctccaaacagagactatattccaatggtc
gtggagctgagaaacaaagaaaataatttactgaagcaagagttctttcatatcatgata
cggataagagaaggcctgctaaaccatccccccaagcccagctttgtggctatgatgatg
atggaaattgatcagtttgtcatgactgctttaacgcctgacatgttagctgcagaagac
gctgaatccgatcctgatgatcttatttttaacatcaccacacctttctcttttgaggaa
ggttacattgtaagtactgatgatagaaatttaccaataacatctttttatcagcgagac
gtcaaggatctgaagatagcatataagccaccgtctatggactcggacacggagagaata
tttcagattgagtttgaagtattggacacggatggtggagtttcagaaccttttgctttc
atgattgttgtaaagcccatgaacacacttgcgccggtggtgacaaaaaacacagggcag
cttttatatgaaggtcagtctagacctctgttcactcagaataatttagaaatcagcgat
gaagacaacctggagagtgtaaggataactgttgtaaatggtctgcgtcatggtgatctc
accatacttggctccagcacaaattttttcacaccagctgatctgcaagttggtattgtt
gtctaccagcatgatggcagtgatacgtacagtgataacataattttcagaatgactgat
ggcaagaatgaagtggagtttttgttccctatttcaattgttccaactgatgatgaacct
cccattataaatgccaacactggattagtggtatttaaacaccaaataattcccatttca
cctttaatgctaagtgcagccgatattgactctgaagattccacaataaagttcaccatt
gaacctccacactcaacagttggagaagtgctgctaaggcagtctgaggctccagaagat
ccatcttcatggaaattcaatatggaagacggtttatatgagaaagttgtgacagagtgg
caacagaaagacataacagatggcaaacttttctacagacacacagggccccacatcact
gagcctgtcagtgaccagtttatctttaaagttcaggatgatgctgatcctccaaaccaa
tcagatgagaacactttcttcattaggattcttcctattgatgatgttccacctgtactt
tttcttggcacttctttacagatgacagtccatgagtatcagatgactagttttaacaag
aatgtccttcgctatactgatttggattctgatgacagagatctaaaatacataataacc
cagcctccaactgacacagatgaaagtcgcccagtcagatttggttcaatagttttaaca
gagcatcctaacactgaggtaagagagttcactcaagcacaagtgaaccatcataagatt
tcctacaatccaccagacattgagttgggcatcacaacccatgttgcacagttccatttt
acagttgaagacactgctggaaatagtgtgaaaggaatttgtaccatattggtgcaacct
gttaataacaagcccccagagataaccaacacaggtttcacagtctttgagcgaggtatg
catattcttacaaatgctgagcttgatactactgaccttgatacagatagtaaacagatt
tcctttactttaagtcagattccacaacatgggcaagtccagcttagctttgcagatttg
gttaaagggaggtcatttagcctacaagatatctcagagggcagaatttcttacgtccac
aatggggatgagacaaccagtgatgcttttaaactggatgtcagtgatggtgtccatatt
gtaccagtaacagtaagaataacagtgaaaccagttgatgatgaaatgccaactctgact
ctgacagcgggtattcttggttctcatctgtctgtgttggaaaatggtgctgctgaaatc
actgtcagcataatccaggggaaagatgaagacacagatgacctcaggctgacctttatt
gtcgagaacgccccgttatacggagagatcatggtaaatggaataccttctaacatgttt
acccaagccgatataatcaatggtttggtgacgtatacccattcaagtggtgagattggt
cttttctcgaagcaggaccatttcaatttgaccctaactgacatgtctgacgagtgggct
gtaggaggaaataaaatcactggagtatctgttcatgtttccattcttccagtggataac
caggccccaatcgtaaaagtggttcctacattcagtgtcactgaaggagacaaaaacaca
attggagaccaccaaataattgttgatgatgcagacacacccactgaagatattttgtgt
actattgtcgttcagccaaattcaggttatatggagaatgtctctccagcaccaggctct
gagaagtccaggtctggcacagctattagcgctttcagtattagagatatcaaggctggc
catatacactatgtccaaagcattcataaaggagttgaacctgtagaggacagattcacg
ttcaggtgctcagatggtgttaatttctcagagagacagttttttccaattgtaattatc
ccaaccaatgatgagaaaccaaaaatatttgcaagagagtttgtggtgatggagggaatg
aacgtcatcatcgacacacccatcctgaatggagttgacggtgatattcctgctgaagat
ttgacttttatcatttcagaaccacccaaacatggatttattcttgatcagttgatcacc
ggctctctcccagttaccaactttactttggagcaaatcaaagaagcttctagtattatt
tatgagcatgatgattctgagacgacagaagacaaatttaatgttattctaacagatgga
aaacataaagtagaaggtactgttaagattatgattattgctgtagatgatgaaactcca
agactggccattaatgatggtttggaaattgagattggggggacaaaggaaatagataat
aagattctgaaggcaactgatttagacacagaagatagcacgcttacatttataattcga
tatggaccaggtcaaggaatcctacagaaaaaaacagaccaagggtcattacagaacatt
acagttgggatgaatttcacacagatggaactggatcagggtctcatattctatactcac
agtggacaggaaggtattcgggaccttataaagtttgatgtaacagatggtagtaatcca
ctaatcgacaggtatttctacattactgtgagtaatattgacgctgtgtttcctgaagtt
gttagcaaaggagtatcgctgaaagaaggaggaagtgtgatgcttaccactgacctactc
agaacaagtgatctcaacagtccagacgaaaacctggttttcactatcaccagagcccct
gtcaggggacatctggaaagcacagacactcccggaatgcccattgtctcttttactcaa
cttcagctggctggaagtaaaatctactacatccatacttcagatgatgaaatcaaaatg
gacagttttgagtttgaggtcactgatggatataaccctgtttttcgcactttccgtata
tctatagttgatgttgacaacaaaaaacctgtcttgacagtacatgaactccgtgtgtca
gaaggtcagtctaaacttatcacaccatttgaattgactgtagaagatcaggatactgca
gaggaattcctgaagttcactgtcacacggttgcctaaccatggtaaactgctctataac
gacagccgtccaattacctctttcacaaagcaagatctgaatgagaacctaataagttac
aaacatgacggcacagagtcctcacaagacagcttcttttttactgtcactgatggaaca
cacactgatttctatgtgtttcctgacacagtgtttgaaactcacaggcctcaagccatg
aaaatcattatttcactgatagacaatggggtaccacaaattgtggtaaacaaaggtgct
caaacattgaaggtcctgccaacaagccacctaggttatcctatcaccagcaaagtgcta
aaggcagaagacagggacagcagcccggagaccctggtctttcacatcaccacacaagca
gagcatggctacctgatcaacctacagaaagggaatgattccatcaatacatttactcaa
gtgaacattaatgaccagcagatctactatgtgctgaaggataagaccaatgccaccagc
gacaattttattttctacgttgaagacaatggaggaaataagatgaaggagcagcacttc
cacctggactgggcctggatctctttacagaaccagaactatgtggtggatgaacaggct
ggggttctggaggttgtgctcagacgaagagggtatctgggggaaacttctttcgtaggc
attggcactttggatggcagtgcccagaagaacaaggactttcggggaaagtttcagaag
caggtgcagtttaacccaggccagaccacagctacatggcggatcaagattctttctgat
gggacgtatgagcagtctgagacctttagtatcactctgtcggagccagtcatgggggta
ttggagtcaccatcagtggcgacagtggagatcgtagatccaggagatgagtctacagtc
ttcattcctcaggcaagaattgttgttgaggaagacattggagagcttctggtcccgtta
cacagaagaggagatgtaagcgaggagctgatggtgctctgctacacgctgcaaggctca
gctacaggtacagtccccagcactgttctttctttctcggactacatctccagaccggag
ggacagaccagcattgtgcgttttaaaaaagaagagacggagaagctttgccgtgtggtg
atcattgacgattcactttacgagcctgaggaaagctttaacgtgtccctgagcgtcgtc
ttaggtggccgcctcggctctgaataccccagcacacacatcagcatcctgccagacatg
gacgatgctccagtgttctacttcggtggtgcagaataccatgtggaggagagccaaggt
cacattgatgtgcaagtgtggagaacaggaacggacctctctaaaacagccaccgtcact
gtcagatcccgtaaaacagatccagtgtcagctgaagctggagtggactatgtgggcatt
agtaagaacttggactttgccccaggggttaacatgcaaaccatccgggtcacaattctg
gacgatcttgggcaaccgctgcttgagggcgctgagaagttcgagcttattctgcgcttg
ccctcaaatgcgattctaggagatccggcaaaagccacagtcctaattaacgattccatc
tcagatctgccaaagatgcagttcaaacatcaccttctgactggagaagagagtgataga
cgtctaacagctgtagtccagcgcagtggagatatcacacatcaatccactgtgcgctgt
tacacacgccagggatctgctcaggtggccagtgactttgaagagagacccaacactgat
gcatcagtcatcaccttcttaccaggtgatacagagaagtcgtgtgtgttaaccttggtg
gacgactcagtgtatgaagaggaggaggagatgaggcttgtgcttgggagtgctacaagt
gactctccatatggagcgtctgtaggcacaaggaacgaaacatttgtcaagattaaagac
agtgctgacaaaccaattatcaggtttgctgagacaaagttgagtgtgactgagccgaaa
gagtcaggaaagataagcactgtgcggatccatgtgcttagagtcggagatgcctccaaa
gtgtccgtggtgagagtgcatactaaagacggttcagcggtgtcaggagaagactatcac
cccatctctcaggatgttgaatttaaggaaggtgaaagagaacatttcgtagaggtggag
gtcctgtttgatggagccagagaaatgagagaagcattcactgtccaccttaaacctgat
gagaacatggtggctgagatccagaggtccaaggccatagtgtatattgaagagacgaac
agcatggcggatgtcactttcccctcactgccacatgtggtgtctctactacactatgat
gaagtcagaaggactacacacaatgctcgcccaccagctggctatccagtcgtctgtgtg
acggcatgcaaccccaggcatccagaatttgagaaaacaggctcaatatgtgcgagtgag
cacatcaatgacacgctaacacattatcgctggcttgtcagtgcacccactggagcggat
ggcgtcaccagccctatgagggaagtagatattgacaccttttttacctcctccaaaata
atcacgctggactccatctactttcaagccgggtcacgggttcagtgcgccgcccgtgct
gttaactccgatggggacgaaggcctggagctcagcagccccattgtatccataagcaca
gaagagggaatgtgtcaccctcataaagtgggcacagtaggtgctgaacccttctctgct
aagctccagtacaccggctctgaggacccagaacatgccaacctcatcaagcttagtgtc
accatgccccacacagatggcatgctcccagtgctctctacccgtgctctgtccaacttc
gagttgactctgagtccggatggaagccgcgtagggaaccaccgctgctccaaccttctg
gactttgatgaggttcccacacgccacggcttcctgacaaaggccactaagaatgcagaa
caagtgggagggagcgcaccctaccaatacaactctaccatgaggggcctgaacacactg
cgcttctatagaaacctcaacctagaagcctgtctgtgggagtttgtaagttattatgac
atgtctgagctgctcacagactgcggcgggagcatcgggaccgacggacaggtgctaaat
ctggtgcagtcctatgtgactctgcgtgtccccctgcatgtctcctacgtctttcactca
cctgtgggtaccagcggctggcagcactttgatttacagtcggagttgcggctcactttt
gtttacgacactgccatcttgtggaaggacggcatcggcagccctcctcaggctgaactg
caaggagcactttacccagccagtatgaggattaatgatgtaggccgtctggtggtcaac
ttccgcaccaaggctcactttcgggggttgtttgtggcctcacatcatgcatcgtcgttg
acctcagtggtcataagtaccgcccacccagggttaacctttaacctttctttggttaga
acggaacccacctacaaccagcccgtgcagcagtggacattcacctcagattttgctgtg
cgtgattactctggaacctacaccgtgaagttaatcccctgcaccacagccctaaacatc
gagtactcagttcctgcagtgtgtgaccccagagagccagtcatgtttgacttggacatc
agattccagcaggtgagtgatcctgttgctgtggagttcaatctgaatacacaaatgttc
ctgctttcaaaaagatcggtgtggctgtccgacggatctatgggcttcggacaggagagc
gatgcggcgttttctaagggtgatacaatctacgggcgagtgatggtggatccggtacag
aacctggggaactcgtttcactgtaatatcgagaaggtgtatttgtgcactggagcagat
ggatacgtgcccaagtacaaccctaccaagtctgagtttggctgcttggcggattctcct
tcattactatacagatttaaaataattgacaaagcacagccagagactcaggctttacgt
tttggtgatataaacttcaacgccgtcctggcagcagacgacccatcagccctctctcta
gtgaaacagcccggctcagatgggttcagactcgactcggatgctttattccaggtgaca
gccggccgagagtggtacatccacaccatttacaccgtgcgctccagagaaaatgcaaac
cgtgggatcggcaaaagaagcgcggagcaccattccttcgtggcgcacaacagccgtgcc
aggcgctctaaccaggacgtgcctgctatcgcggaaacgattagtgccgagcacaatcga
ggcaccaacatcatgcacatcgctctcgagcaccagcaggcagcgcagactggagagatt
cctgctgaaagcctggtacagcgtgaaatggacaggcatggcagtgagaaagaagcagtg
atggcagcgggagtctcagtcgggctcctgctctttggcctcatcgtggctgtgcttttt
ctaatactgcggtcgcagagcagaccagaagaggaggtgagaaagaggtcagagaaggag
ggacttgccacctcaggcagcatgcagcctgttatgttaaggagtggttttgaaggcagc
gatggctctgaagtgtga
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integrated database retrieval system
