Clostridium gasigenes: J1C67_03975
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Entry
J1C67_03975 CDS
T07299
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgas
Clostridium gasigenes
Pathway
cgas03420
Nucleotide excision repair
cgas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J1C67_03975 (pcrA)
03430 Mismatch repair
J1C67_03975 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_03975 (pcrA)
Enzymes [BR:
cgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J1C67_03975 (pcrA)
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J1C67_03975 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
J1C67_03975 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
CarD_TRCF_RID
SUB1_ProdP9
DEAD
Motif
Other DBs
NCBI-ProteinID:
QSW20339
LinkDB
All DBs
Position
CGAS001:complement(807031..809295)
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AA seq
754 aa
AA seq
DB search
MDLKTLLNKEQYEGATTIEGQVLILAGAGTGKTRVLTYRMAHMIEDLGIAPYKILAITFT
NKASKEMQERVKRIIGEKADDMWISTFHSTCVRILRREIEKIGYKKSFSIYDSSDQKVLV
KECMKAIGINDKDLTEQEIIGKISRAKDSMQSPESFMREHEDNFREKKIADVYAMYQKRL
KENNALDFDDLIGKTVEIFKKDEETLEFYQRKFQYIMVDEYQDTNGVQYEFIKLLSAKHK
NICVVGDDDQCIYQWRGADIRNILDFEKDYPEAKVIKLEQNYRSKGNILEAANVLIVNNS
NRKGKELRTEQEAGDKIKVYRAYSDSDEGDFVATNIKEIKEAEDRDYKDFAILYRTNAQS
RIFEECLRRKDIPYKIVGGTRFYDRKEIKDMVAYLKVMVNPEDSISLKRIINVPKRGIGD
ATIQKVADFAQGYEVALWDALSEAGNIPTLTARNSGGIGKFMELMDNFMVLNETVPPSLL
IETILKETGYIEELEKSKEIEDKSRIENLKELVSDAVDFEKNSEDKSLSAYLEKISLVQD
TDKMGDEDDGIVLMTVHSAKGLEFPVVFLVGMENGIFPGNSSFEKQSEMEESRRLCYVAV
TRAKETLYITSAEVRRVFGRTVAYPQSDFIAEIKTDLKEYINGKAAGTPSRAKVFKPSAP
AYNPHSLRKNFGDNRTYASANPQDVIEDEAAVAENENMLTKEETTIGRKVSHERFGIGTI
VSIEDVSRDKKLTIAFDRQGVKILLLSLANLELI
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagacattacttaacaaagagcagtatgaaggtgccacaactatagaaggc
caagtgctaattttagcaggggcagggactggtaaaacaagagtactgacatatagaatg
gcacatatgatagaggatttaggtatagcaccatataaaatattagctattacttttact
aataaagcatcaaaagaaatgcaggaaagagttaaaagaataataggcgagaaagctgat
gatatgtggatctcaactttccactcaacttgtgtaagaatactaagaagagaaatagag
aaaataggctataaaaagagctttagcatatatgatagttcggaccaaaaagtacttgta
aaagaatgtatgaaggctattggtataaatgataaagatctaacagaacaagagataata
ggaaagataagtagagctaaagatagcatgcaaagcccagaaagctttatgagagaacat
gaagataattttagagaaaagaaaattgcagatgtttacgctatgtatcaaaaaagactt
aaagaaaataatgctttagattttgatgatttaataggtaaaactgttgagatatttaaa
aaagatgaagaaacattagagttttaccaaagaaagttccaatatattatggtagatgaa
tatcaagatactaatggagttcaatatgagttcataaaattattatcagctaagcataaa
aatatatgcgtggttggagatgatgaccaatgtatatatcaatggagaggcgcagatatt
agaaatattttagactttgaaaaagattatccagaggctaaagttataaaacttgaacaa
aattatcgttcaaagggaaatatacttgaagcagctaatgttcttatagtaaataactct
aacagaaagggtaaagaacttagaacagagcaagaagcaggagataagataaaagtttac
agagcatattcagatagtgatgaaggtgactttgtagcgactaacataaaagaaataaaa
gaagcagaagatagagattataaagattttgctattctttatagaacaaatgcacaatca
cgtatatttgaagaatgtttaagaagaaaagatattccttataaaattgttggtggaaca
agattctacgacagaaaagaaattaaggatatggtagcatatcttaaggttatggttaat
ccagaagatagcataagtttaaagagaattataaatgttcctaaaagaggaataggtgat
gcaacaattcaaaaagtggcagattttgctcaaggttatgaagttgcattgtgggatgcg
ctgtcggaagctggtaacatacctactttaacagctagaaactcaggcggaataggaaag
ttcatggagcttatggataatttcatggttttaaatgagactgtacctccttcattatta
attgaaactatattaaaagaaactggatatatagaggaacttgaaaaatcaaaagaaatt
gaagataagagtagaatagaaaatcttaaagaattagtgtctgatgctgtggattttgaa
aaaaacagtgaagataagagcttaagtgcatatttagaaaaaatatcattagttcaagat
actgataagatgggtgatgaagatgatggtatagtcttaatgactgtgcatagtgctaag
gggcttgagttcccagtagtattcttagttggaatggagaatggtatattcccaggaaac
tcatcttttgaaaaacaatcagaaatggaagagtcaagaaggctttgttatgttgcagta
acaagggcaaaggaaactttatatattacatcagctgaagtaagaagagtatttgggaga
actgtagcatatcctcaatctgattttattgctgaaataaaaactgatttaaaggaatat
ataaacggaaaagcggcaggtacaccttcaagagctaaggtgtttaaaccaagcgctcct
gcatataatccacatagtttaagaaaaaactttggagataacagaacttatgcatcagca
aatcctcaagatgttatagaagatgaagcagcagtagctgaaaatgaaaatatgttaact
aaagaagaaaccactattggtagaaaagttagccatgaaagatttggtattggaactata
gtatcaatcgaagatgttagtagagataaaaaattaacaatagcctttgatagacaaggg
gtaaaaatattgttattatctttagcaaacttagaattgatttag
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