Clostridium gasigenes: J1C67_05250
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Entry
J1C67_05250 CDS
T07299
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cgas
Clostridium gasigenes
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgas03032
]
J1C67_05250
03036 Chromosome and associated proteins [BR:
cgas03036
]
J1C67_05250
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_05250
DNA replication proteins [BR:
cgas03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J1C67_05250
Chromosome and associated proteins [BR:
cgas03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J1C67_05250
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J1C67_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Peptidase_C80
RNA_polI_A14
Phage_portal_2
Arm-DNA-bind_4
VWA_3
Motif
Other DBs
NCBI-ProteinID:
QSW20570
LinkDB
All DBs
Position
CGAS001:complement(1054475..1054750)
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AA seq
91 aa
AA seq
DB search
MNKAELITSMAEKSKLTKKDAEAALKSFIESVEETLEKGEKVQLVGFGTFETRERAAREG
RNPRTKETIQIAASTVPVFKAGKEFKEKVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcagaattaattactagtatggcagaaaagagcaaattaactaagaaggat
gcagaagcagctttaaaatcatttatagaaagcgttgaagaaacgttagaaaaaggtgaa
aaagttcaattagttggatttggtactttcgaaactagagaaagagcagctagagaagga
agaaacccaagaactaaagaaactatacaaatagcagcatcaacagttccagtatttaaa
gctggaaaagaattcaaagaaaaagttaataaataa
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