Clostridium gasigenes: J1C67_06565
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Entry
J1C67_06565 CDS
T07299
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
cgas
Clostridium gasigenes
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
PAS_8
HTH_50
PTS-HPr
AAA_5
HTH_8
Mg_chelatase
AAA_2
GdpP_PAS
HTH_1
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QSW20797
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Position
CGAS001:1337092..1339212
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AA seq
706 aa
AA seq
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MELKRELTIKLKDGLHTRVIAAIAREAIKIEQKYDVKLYIEYEHRGITPIGAVMSFIFFK
VRQGEAITIYAKGNGDLNSALNEIEPFFGDKINDFLSKEIKDIDIMITDKAITFGEIINY
IDNGVIVEDLNGEITFINSATPKLLGIEGNEIIGSTVASILGKPKKISPQSSSQIYRREK
DGKRFIIYKNKLIIENEDKGNIYVLENVSMLEEVIEELSIVKELKEKLQLIIDTVGDGIC
VINNKGIITYVNNNYKKMVDDEELLGKNIVDISPEGLRNSVLETGVAKIGEIVKKRNCNE
MICSVYPLKVEDEQVGVVSIAKEISNVKKLTEKLDKASERVKYLEQELIRTRKPHQAFDK
YIGKSGKILDSLALATKAAKSNATVIIRGESGTGKELIAEGIHYASNKSEGPFIRVNCAA
IPETLIESELFGYEKGAFTGAVKRKLGKFELAQNGTIFLDEIGEMDKNTQSKILRVLQYK
EFQRVGGESTVKVNVRIIAATHRNLEDMVRDGEFREDLYYRLNVIPVILAPLRDRKEDIP
LLAEHFIDKLKGDKKIIGITNDAMNKFMEYTWRGNVRELENVIERIIALCEEGVIGLDDL
PMHILDDKEYVTYSRKSELNIEGNQNEEKAILEESQKVKKICGDEIENIIKNDKLLTMKE
YEKIIIEKALIENGSYNKAAKALGLTHRTVSIKAKQYGIEKIITWK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaaagagaattaacaataaaattaaaggatggattacatacaagggtaata
gctgcaattgcaagagaggctattaaaatagaacagaaatatgatgttaaactttatata
gaatatgaacataggggaataacgcctataggtgcagtaatgtcatttatattttttaag
gttaggcaaggggaagcaataactatctatgcaaaaggtaatggggatttaaattcagca
ctaaatgaaattgaacctttttttggagataaaattaatgattttttatctaaagaaatt
aaagatatagatataatgataactgataaagcaattacatttggggaaataattaattat
atagataacggagttatagtagaggatttgaatggtgagataacatttataaattcggct
actcctaagctattagggatagaaggtaatgaaattataggaagcactgtagcttctata
ttaggaaaacccaaaaaaataagtcctcaaagctcaagtcaaatatatagaagagaaaag
gatggtaaaagattcattatatataaaaacaaattgattatagaaaatgaagataaaggg
aatatttacgttctagagaatgtttcaatgttagaagaggtaatagaagaactttcaata
gttaaagagctaaaggaaaagttgcaattaattatagacacagttggagatggaatatgt
gtaataaataataaagggataataacttatgtaaataataattataaaaaaatggtagat
gatgaagaattactaggtaaaaatatagtagatatatcaccagaaggtttgagaaatagt
gttttagaaactggtgttgctaaaataggagaaatagttaagaaaagaaattgcaatgaa
atgatctgttctgtttatccactaaaagtagaagatgagcaagtgggtgtggtttctatt
gccaaggaaatatctaatgtaaaaaaacttactgagaagttggataaggcctctgaaaga
gttaaatatttagaacaagaacttattagaacaagaaaacctcatcaggcttttgataaa
tatatagggaaaagtggtaaaatattagattcattagcattagcaacaaaggcagctaaa
agtaatgctactgtaataattagaggtgaaagtgggacgggtaaagaacttattgcagaa
ggaatacattatgcaagtaataaaagtgaagggccatttataagagtaaattgtgcagct
attccagaaacactaatagaaagtgagttatttggatatgagaaaggtgctttcacaggt
gcagtaaaaagaaaactaggtaagtttgaattagctcaaaatggaactatattcttagat
gaaattggtgaaatggataaaaatactcaatctaaaatattaagagtattacaatataag
gagtttcaaagggttggaggagaaagtactgtaaaggtgaatgtaagaattattgcagct
actcatagaaaccttgaagatatggttagagatggggagtttagagaagatttatattat
agattaaatgtaataccagtaatactagcgcctcttagagatagaaaagaagatataccc
ttattagcagaacattttatagacaagcttaaaggtgataaaaaaataataggaattaca
aatgatgctatgaataaatttatggaatatacatggagaggaaatgttagagaacttgaa
aatgtaatagaaagaattatagctctttgtgaagagggtgttataggattagatgatttg
cctatgcatattttagatgataaagaatatgttacctattcaagaaagagtgaattaaat
attgagggaaatcaaaacgaagaaaaagcaatacttgaggaatcccaaaaagttaaaaaa
atatgtggagatgaaattgaaaatataataaagaatgataaattacttactatgaaagaa
tatgaaaaaattataatagaaaaagcattaatagaaaatggaagttataataaggcagca
aaagctttagggttaactcatagaacagtatctataaaggccaagcaatatggaattgaa
aagattattacttggaaataa
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