Clostridium gasigenes: J1C67_08710
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Entry
J1C67_08710 CDS
T07299
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgas
Clostridium gasigenes
Pathway
cgas03420
Nucleotide excision repair
cgas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J1C67_08710
03430 Mismatch repair
J1C67_08710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_08710
Enzymes [BR:
cgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J1C67_08710
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J1C67_08710
MMR (mismatch excision repair)
Other MMR factors
J1C67_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
DEAD
Viral_helicase1
UvrD_C_2
AAA_30
SLFN-g3_helicase
PhoH
nSTAND3
NACHT
Mit_ribos_Mrp51
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QSW21162
LinkDB
All DBs
Position
CGAS001:1821635..1823737
Genome browser
AA seq
700 aa
AA seq
DB search
MDKIELIGEQQNLDRTLEVLNLEILNYIKKRKGIAQYILDYRKKFIEDHKDDEDNIMEYF
DHEKYVKEQAYSTIDRKLSEFTKLKESPYFGKVTFTDEEDKEEIYIGRYGLTPEESYKES
VVDWRAPVASLFYKGMIGETSYKAPNGEVPVEITARRQLMVKKGLLEGYFDSDVDVKDEI
LQMILSSNAGEKLKDIVISIQQEQDEIIREERTKVVVVNGVAGSGKTTIALHRVAYLLYN
FREQLTNKVLIFGPNDIFIDYISDVLPTLGESGISQETFVGFAYDEIGLDEPIIDSPTYL
EDVLKGNEEVINKIKYKSSKEFITFLDEKVAQYEDKYFTITPVNFMGEEIVTVEEIEVLF
NKHYKYMPLFRRSQKVKLIIISKLKDKRDEKVRTLNAEFKEKLASLTPEELLIEENNMDF
ERKNKIRDIVKEVVKSKEELEQWISNESIVDMYKEFMDVKTLTYLDLPAILYLMIKLDGK
KVKQDIRHIVIDEAQDYSFLQFLVLKELTGCKSYTIVGDSNQRLIKIEEIPPMLKLKELF
GGFVKDFSLNKSYRSTYQIMEYASKLLDEKAVVPFVRKGEFDVLETEVPETDKEGLIDVL
LNLLEEYQDEKYENIAIITKGKEQLQKIAPELKKHTKIVAFDREDMIYKGGKVLVPSYYA
KGLEFDGVIIVDFDDNTDDLVKYIMATRALHRLSIVKVTR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttggataaaatagagttaataggtgaacaacagaacttagatagaacattagaagtttta
aaccttgagatattaaattatataaagaaaagaaagggtatagcccaatatatacttgat
tatagaaagaaatttattgaagatcataaagatgatgaagataatataatggaatatttt
gatcatgagaaatatgtaaaagaacaagcttatagcacaatagatagaaaactttctgag
tttacaaaactaaaagaatcaccatactttggtaaagttacttttactgatgaagaagat
aaagaagaaatatatataggtagatatgggttaactccagaggaaagttataaagagtca
gtggtagattggagagctccagtagcttcattattttataagggaatgataggagaaact
tcatataaagcaccaaatggagaagttccagtagaaataacagcaagaagacaacttatg
gttaaaaaaggtctattagaaggttattttgattcggatgtagatgttaaggatgaaatt
cttcaaatgatactttcatcaaatgctggagaaaagttgaaagatattgtaattagtata
caacaagagcaagatgaaataataagagaagaaagaactaaggttgttgttgttaatgga
gttgcaggttcaggtaaaactacaattgcacttcatagagtagcatatcttttatataat
tttagagaacaattaactaataaagttttgatttttggaccaaatgatatatttatagat
tatatttcagatgtactacctacccttggagaaagtggaataagccaagaaacatttgta
ggatttgcttatgatgaaattgggttagatgaacctataattgattctcctacatattta
gaagatgtattaaaggggaatgaagaggtaataaataaaataaaatataaatcatcaaaa
gaatttataacattcttagatgaaaaagtagctcaatatgaagataaatatttcactatt
actcctgttaattttatgggagaggaaatagttacagtagaagaaatagaagtgttattt
aacaagcattataaatatatgcctttatttagaagaagccaaaaggttaaattaattata
atttctaaacttaaagataagagagatgaaaaagtaaggactttaaatgcagaatttaaa
gaaaagctagctagtttaacaccagaggaacttttaattgaagaaaataatatggatttt
gaaagaaaaaataaaataagagatatagttaaagaagtagttaaatctaaagaagagtta
gagcaatggataagtaatgaaagcatagttgatatgtataaagagtttatggatgttaaa
acactaacttatttagatttgccagctatattatatttaatgattaaattagatggtaaa
aaagtaaaacaagatataagacatatagtaatagatgaggctcaagattatagcttcctt
caattcttagttttaaaagaattaactggatgcaagagctataccattgtaggagattca
aatcaaagattaataaaaattgaagaaatccctccaatgcttaagcttaaagaattattt
ggtggatttgttaaagattttagtttaaataagagttatagatcaacttatcaaataatg
gaatatgcaagtaagcttctagatgaaaaagcagttgttccttttgttagaaaaggagaa
tttgatgttttagaaacagaagttccagaaactgataaggaaggtttaatagatgtatta
ttaaatctattagaagaataccaagatgaaaaatatgaaaatatagctataataactaaa
ggtaaagaacagctacaaaaaatagcgccagaattaaaaaaacatacaaagatagtagcc
tttgatagagaagacatgatatataaaggtgggaaagtattagtaccatcatattatgca
aagggactagaatttgatggagttataatagtagattttgatgataatacagatgattta
gttaaatatattatggcaacaagagcattacacagattatcaatagtaaaagtaactaga
tag
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