Clostridium gasigenes: J1C67_10305
Help
Entry
J1C67_10305 CDS
T07299
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cgas
Clostridium gasigenes
Pathway
cgas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1C67_10305 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgas03019
]
J1C67_10305 (recQ)
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_10305 (recQ)
Enzymes [BR:
cgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J1C67_10305 (recQ)
Messenger RNA biogenesis [BR:
cgas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J1C67_10305 (recQ)
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J1C67_10305 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
DUF763
Motif
Other DBs
NCBI-ProteinID:
QSW17972
LinkDB
All DBs
Position
CGAS001:2199364..2201127
Genome browser
AA seq
587 aa
AA seq
DB search
MTSPIEILKKYFGYSSFREGQQEIISNIMRGRDSFAIMPTGGGKSVCYQIPAAIFSGITL
VISPLISLMKDQVDNVNDIGINAEYINSTQNLDEIKCIFERCYKGDVKLLYIAPERLEND
YFIKMLRRITISQVAVDEAHCVSMWGHDFRKSYTNIAPFIRSLENRPIVTAFTATATMEV
RKDIIKLLELSNTYTYLGSFNRDNLSINVHIEEDKLEFVKDMIREKEEESGIIYCLTRKE
VDALYEYLKENGYNVGKYHGGIKDEEKKYWQEEFLNENINVMIATSAFGMGIDKSNVRYI
IHFTLPKNIECYYQEIGRSGRDGGVAKCHLLYSRRDIRTLEYMINSTTSIGRRQIDLMKI
QGMIDFCETKDCYRSFILKYFGEEKFNNYCNNCSNCLKNDELRDYTRETQMILSCVYRTR
ENFGISVLIDILRGFRGPKIIQNKLDELTTYGIMKEYNNKFIRDLIKTLIDLGYVGLRDG
TYSMLKLNAKSIKVLKSQEKVICKLEEDVEEQILDKELFQNFKLWRKEKAYKEKIKPYII
FSDSTLIELSNKQPKDKEELMAIRGMGEKKFERYGEEILDLINLKKV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgactagtcctatagaaattttaaaaaagtattttgggtatagttcttttagggaaggg
caacaagaaataatttcaaatataatgaggggaagagatagttttgctattatgccaact
ggtggcggaaaatctgtatgctatcagattccagcagctatatttagtgggataacttta
gtaatatctcctcttatatcattaatgaaggatcaagttgataatgtcaatgatatagga
attaatgcagaatatataaatagcactcaaaacttagatgaaataaaatgtatttttgaa
agatgttataaaggtgatgttaaacttttatatattgcacctgaaaggcttgaaaatgat
tattttattaaaatgcttagaaggataactataagtcaagttgcagttgatgaagctcat
tgtgtttctatgtggggacatgattttagaaaaagttatacaaacatagcaccatttatt
aggagtttagaaaatagaccaatagtaacagcttttacagccactgcaactatggaagta
agaaaagacataattaaattattggaactttctaatacatatacctatttaggaagtttt
aatagggataatttatctattaatgtacacatcgaagaggataaattggaatttgttaag
gatatgattagggaaaaagaagaggaatctggaataatatattgtttgacaagaaaagaa
gtggatgctttatatgaatatttaaaagagaatggatataatgttgggaaatatcatggt
ggcattaaagatgaagaaaagaaatattggcaggaagaattcttaaatgaaaacataaat
gttatgatagccactagtgcatttggaatgggaatagacaaatcaaatgttaggtacata
attcactttacgttacctaaaaatatagaatgttattatcaagaaataggaaggtctgga
agagatggaggagtggcaaaatgccacttgctttattcaagacgtgatataagaacttta
gagtatatgataaattcaactaccagtataggtagaagacaaatagatcttatgaaaatt
caaggtatgatagatttttgtgaaactaaggattgttatagaagttttatattaaaatat
tttggagaagagaagtttaataattattgtaataactgtagcaattgtttgaaaaatgat
gagcttagggattatacaagggaaactcaaatgatattatcttgtgtttatagaacaaga
gaaaattttgggatatcagttttaatagatatcttaaggggatttagaggtcctaaaata
attcaaaataaattagatgagttaactacctatggaataatgaaagagtataataataaa
tttattagagatttaattaaaaccttaatagaccttggatatgtaggcttaagagatgga
acttattctatgctaaaattaaatgctaaatcaataaaagttttgaagtcacaggaaaaa
gtgatttgtaagctagaagaagatgtggaagagcaaattttagataaagagttattccaa
aactttaaattatggagaaaagaaaaagcttataaagaaaaaataaaaccatatattata
ttctcagattctactcttatagagttatcgaataaacagcctaaggacaaggaagaactt
atggcaataaggggaatgggagaaaagaaatttgaaagatatggagaagaaattttagat
ttaataaatttaaaaaaagtatga
DBGET
integrated database retrieval system
