Clostridium gasigenes: J1C67_13020
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Entry
J1C67_13020 CDS
T07299
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cgas
Clostridium gasigenes
Pathway
cgas03030
DNA replication
cgas03410
Base excision repair
cgas03420
Nucleotide excision repair
cgas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J1C67_13020 (polA)
03410 Base excision repair
J1C67_13020 (polA)
03420 Nucleotide excision repair
J1C67_13020 (polA)
03440 Homologous recombination
J1C67_13020 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgas03032
]
J1C67_13020 (polA)
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_13020 (polA)
Enzymes [BR:
cgas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J1C67_13020 (polA)
DNA replication proteins [BR:
cgas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J1C67_13020 (polA)
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J1C67_13020 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J1C67_13020 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
Tipalpha
HHH_2
XPG_I
Motif
Other DBs
NCBI-ProteinID:
QSW18467
LinkDB
All DBs
Position
CGAS001:2791720..2794329
Genome browser
AA seq
869 aa
AA seq
DB search
MERLLILDSNSLLNRAFFAIPPLTTSEGVNTNAVYGFFNMLFKIKEELKPDYIVATFDRK
APTFRHKEFDEYKAGRKKMAPELAEQFPLVKEILSLLSITIHEIDGFEADDIIGSLAKNA
EENGIEVFIVTGDKDALQLASENINVVITKKGVSETAIYDYKTFVEEFGVTPNQFIDVKG
LMGDKSDNIPGVPGIGEKTAFKLIQTYGSVEEVLNNIDNISGKKLKENLEIYREQAIFSK
KLATIMTEVPIDFDFDEIKSQQEYNREKLIKLLFKLQLKTLIPKLPESNKEEKEEVIIDV
KEVNTLQELNDVINNLNERSYITYEISNASKYSEINLDNMMIYDGEIVSSINMKEIIEEN
KDGSMLALKNFMENEKIFKVINDGKNLVTVLNKMGISIKSFDFDTAIAAYLIDSAKSSYP
IITLVNEYLGEEITGEGISLKGNIVIKMKDLYEVLKNRIKDEDMDELYYTIEHPLIFVLS
SMETLGFNINKNKLDELSVIFKEEIKRTEKEIFALSEEEFNISSPKQLAKILFEKLDLPV
IKKTKTGYSTNAEVLEKLQDKHEIIPKITYYRTITKLNSTYVEGLKNVIDKDGCIHSSFN
QTVTTTGRLSSTEPNLQNIPIRQEMGREIRKVFIPMSEGDILLSCDYSQIELRVLAHMAE
ETNMIDAFKHHTDIHTKTASEVFKVPINEVTSIMRSRAKAVNFGIVYGISDFSLSQDLKI
TKKEASEYMEIYFERYPKIKGFLDTVMEEAKDLGYVLTLLNRRRFIPEIKSSNRIVKALG
ERLAMNAPIQGSAADIIKLAMVNVYNTLNSRNLKSTMILQVHDELILNVKADELEEVKKL
VKEEMEAVLKLSVPLDVDMNLGKTWYEAK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattacttattttagattcgaacagtcttttaaatagagctttttttgcaatc
ccaccacttacaacaagtgaaggggtaaatacaaatgcagtttatggatttttcaatatg
ttgtttaagattaaggaagaattaaaaccagattacatagttgcaacttttgatagaaag
gcgccaacatttagacataaagaatttgatgaatataaagctggaagaaaaaaaatggct
ccagaacttgcggagcaatttccattagttaaggagatactttcattattatccattact
attcatgaaatagatggatttgaggcagatgatataataggttcccttgcaaagaatgca
gaggaaaatggaatagaagtgtttatagtaacaggagataaggatgctcttcaattagca
tcagaaaatataaatgtagttataactaaaaaaggtgtaagtgaaacagcaatttatgac
tacaaaacttttgtagaagaatttggagtaacaccaaatcaatttattgatgttaaaggg
ttaatgggtgataaatctgataatataccaggagttccaggaataggagaaaaaactgcc
tttaagttaattcaaacttatggttctgtggaagaggtattaaataatatagataatatt
agtggtaaaaaacttaaagagaatttggaaatttatagagaacaagcaattttcagtaaa
aagttagctactataatgacagaagttcctatagattttgattttgatgaaattaaaagt
caacaagagtacaatagggaaaaacttataaagttattatttaaacttcaattaaaaaca
ttaatacctaaattaccagaatcaaataaagaagaaaaagaagaagttattatagatgta
aaagaagttaacacgcttcaagaattaaatgatgtaataaataatttaaatgaaagaagt
tacattacttatgaaataagtaatgcctctaaatactcagaaataaacttagataatatg
atgatttatgatggcgaaatagtttcttcaattaatatgaaagaaataattgaagaaaat
aaagatggaagcatgctagctttaaaaaactttatggaaaatgaaaaaatatttaaagta
ataaatgatggtaaaaatttagttacagtattaaataaaatgggaataagcataaaaagt
tttgattttgatactgcaattgcagcttatcttatagattctgcaaaatcaagttatcca
ataataactcttgtaaatgaatatctaggagaagaaattacaggagaaggtatttcttta
aagggtaacattgtaattaaaatgaaggacttatatgaagttttaaagaataggataaaa
gatgaagatatggatgagttatattacacaattgaacatccattaatatttgttctgtca
tctatggagactttaggatttaatattaataaaaataaattagatgaattatctgttatt
tttaaagaagagataaagagaacagaaaaagaaatttttgcattatcagaggaagagttt
aatataagttcaccaaaacaacttgcaaaaatattgtttgaaaagttagatttacctgta
attaaaaaaactaaaactggatattcaacaaatgcagaggttttagaaaaattacaggat
aaacatgaaataattcctaaaataacttattatagaactataacaaaattaaactcaaca
tatgttgaaggattaaaaaatgtaattgataaagatggatgtatacattcaagttttaat
caaactgtaacaactacaggaagattatcaagtacagaaccaaaccttcaaaatattcca
attagacaagaaatgggaagagaaattagaaaagtatttattcctatgtcagagggggat
atattattatcttgtgattattctcaaatagagcttagagttcttgctcatatggcagaa
gagactaatatgattgatgcttttaaacatcatactgatattcatactaaaactgcttca
gaagtgtttaaagtgcctataaatgaagttacatcaataatgagaagcagagcaaaagct
gttaactttggtattgtttatggaataagcgattttagtttatcacaagatttaaaaata
actaaaaaagaagcttcagaatatatggaaatatactttgaaagatatccgaaaataaaa
ggtttcttagatacagtaatggaagaggctaaagatttaggttatgttttaacacttcta
aacagaagaagatttattcctgaaataaaatcttcaaatagaatagttaaggctcttgga
gaaaggcttgcaatgaatgcaccaattcaaggtagtgctgcagatataattaaacttgct
atggttaatgtgtataacacattaaatagtagaaacttaaaaagtacaatgatactacag
gttcatgatgaacttattttaaatgtaaaagcagatgaacttgaagaagttaaaaaatta
gttaaagaggaaatggaagcggtactaaaactttcagtgccgttagatgtagatatgaat
ttaggaaaaacatggtatgaagctaaataa
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