Clostridium gasigenes: J1C67_15010
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Entry
J1C67_15010 CDS
T07299
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cgas
Clostridium gasigenes
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgas03019
]
J1C67_15010
Messenger RNA biogenesis [BR:
cgas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J1C67_15010
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QSW18839
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All DBs
Position
CGAS001:3201888..3202784
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AA seq
298 aa
AA seq
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MKEKYLNEVKIGEKVEMSLMIIKILSRDELTMTAYIGDKTKEVKAVLKDEKKKLTVGHVV
KTKGTYGNLYKAEVLQIIEDFDLRDYVPSVKRPVEDIMKELEELTYIEFKSPEVISLNNY
FFKDEKFLERFTKAIGGVYQHHNYLGGLAEHTLGVTYLAKMFADRYNCRHKEIAILGAKL
HDIGKIKEMNYDGPFTYSLEGEMEGHIVIGVTMLEEAFRANPELYTHEFRQRIKGIIVQH
HGKLEYGSPKTMKSQESYIVHYSDYVDSTMNKIDIVMDGVEEGEWTSYERRMDGKLFV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaagtatttaaatgaagttaaaataggtgaaaaagttgaaatgtcattaatg
ataataaaaatattatcaagagatgaacttacaatgacagcgtacataggagataaaaca
aaagaagttaaagcagtgcttaaagatgaaaagaaaaaacttaccgtgggacatgtagtt
aaaactaaaggcacatatggaaatctttacaaagcagaagtcttacaaattatagaagac
ttcgatttacgggattatgtgccatcagtaaagagaccggttgaagatataatgaaagaa
ttagaagaacttacatatatagagtttaaaagtccagaagtaatctctttaaataactat
ttctttaaagatgagaagtttttagaacgatttacaaaagctattggaggagtatatcaa
caccataattatttaggtgggctcgcagagcatactttaggggtaacttatttagcaaaa
atgtttgcagatagatataattgtagacataaagaaatagctatacttggagctaaacta
catgatattggtaaaataaaagagatgaattatgatggaccatttacttactcactagaa
ggcgaaatggaaggtcatatagttattggagttacaatgcttgaagaagcatttagagca
aatcctgagttatatacacatgagtttagacaaagaattaaaggtattatagttcaacat
catggaaagctagaatatggatcaccaaaaacaatgaagagccaggaatcttatatagtt
cattattcagactatgtagattcaactatgaataaaattgatattgttatggatggtgta
gaagaaggcgagtggacttcttatgaaagaagaatggatggaaagctttttgtataa
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