Clostridium gasigenes: J1C67_15375
Help
Entry
J1C67_15375 CDS
T07299
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cgas
Clostridium gasigenes
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_15375
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J1C67_15375
Archaeal homologous recombinant proteins
J1C67_15375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QSW18907
LinkDB
All DBs
Position
CGAS001:complement(3281514..3284678)
Genome browser
AA seq
1054 aa
AA seq
DB search
MKLQKLIITGFGPYASRQELDFEENLKGKNMFVITGNTGAGKTTIFDAINFSLYGDPSGS
DRESKSLRSDFAEADTKTEVEIFFSLREKEYHVTRTPSYFKPKKNGDGFTESKPTAELRI
IGGKTITGSKEVTREIESILGISSEQFKQLVMIPQGEFKKLLNSKSDEKEAIFRKIFGTE
IFEKIQRDIKEQSIKLKKTIEQVERDRLGKIRSFICKEKDEELFRIINADNLNIEVIMKS
FNRFIENDKEDQLLLENQINSINKVIEETSRSLTIGEETNNKFISLEKNKEELYDLTKLI
KEFEEKTVALDRGRKAISVKVYEDKYNEKNIYLKKVKEEILEIEQKIESYKDSSLKATEQ
FRLQQGKEKEKDQLIKDIDENLRLKTKVLEHEKIFNKVNKFSIEVATLKNKIKEIELNKE
ENTSNINQFSKDIEKINLAKEEKGKLEAEKLEYTNKNSKLNTLSNNINQWNINYKKHLTE
RIMFKKLEEQFNKEKSQTESLEDTLRKSQAGLIALGLEDGVCCPVCGSSNHPKLAKLANS
EITEEYVNNSKDSLEKIREVKENKLTELTDINSTLKSIKENSIDILSTELLNKELLNNNQ
VTEAQYENLQEIKVEVIALINNNNFVLLELKSKIEILNNIIIKENHKINEKQRREKDNEL
LREELKVRNAEYILNEGSLRVLINNLDNIKNEFKGEMRTLKELDIIENSLTIKIRKLKSD
YDESEKIFNISKTLLDQEMGSYKKAKQVRNLAEEELKEALTIFKEKVLDLGFENYKDYKL
CMLLELEIASLNKEINNFNSKLAATQKLYEVSLKDVHGKVIVDLTIIKGKLNEEINNRIE
LLEKSKELFSRIRNNSSVIELCEKYNKEIEIDEKEYKTVGKLSNIINGDNPKKISFERYV
LAAYFEDIIKASNIRFNKMTSNRFELLRKQIVGDMRKGQGLDLEVFDNYTGKSRDIKTLS
GGESFKASLAMALGLADIVQAHAGGIQLDTMFIDEGFGTLDPESLDNAIECLIDLQNDGR
LVGVISHVEELKERIDARLEISLTNKGSKAQFKV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcaaaaattaataataacagggtttggaccttatgcatcaagacaggaatta
gactttgaagaaaaccttaaaggaaagaatatgtttgttattacaggaaatactggagca
ggaaaaacaacaatatttgatgcaattaatttttctctttatggagatccaagtggaagc
gacagagaaagtaagtctttaagaagtgactttgcagaagcagatactaaaacagaagtg
gaaattttcttttcactaagggagaaggagtatcatgttacaagaactccttcctatttt
aaacctaaaaaaaatggggatgggttcacagaaagtaagccaacagcagaactaagaatt
atagggggcaaaaccatcacagggtctaaagaagtaactagagaaatagaaagtattctt
ggtataagttcagaacagtttaaacaattagttatgattccccaaggagagtttaaaaaa
cttttgaactccaaaagtgatgaaaaggaagcaattttcagaaagatatttggaacagaa
atatttgaaaaaattcaaagggatataaaggagcaatcaatcaaactaaaaaagactata
gagcaagtagaaagggatcgattagggaaaataaggagctttatttgtaaagaaaaagat
gaggaattatttaggattataaatgcagataatcttaatatagaggttattatgaaaagt
tttaatagatttatagaaaatgataaagaagaccaacttctattagaaaatcaaataaat
agtattaataaagttatagaagaaacatctagaagtttaactattggagaggaaacaaat
aataaatttataagcttagaaaagaataaagaagagttatatgatttaactaagctgatt
aaagaatttgaagaaaaaacagtagcattagatagaggaagaaaagcaataagtgttaaa
gtttatgaagataagtataatgagaaaaatatttatttaaaaaaggttaaggaagaaata
ttagaaatagaacagaaaatagaaagttataaagatagtagtttaaaggcaactgagcaa
tttagacttcagcaaggcaaagaaaaagagaaagatcagttaataaaagatatagatgag
aacctaagattaaaaacaaaggtattagaacacgagaaaatatttaataaggttaataaa
ttttcaatagaagtagcaacattaaaaaataaaattaaagaaatagaattaaataaagaa
gaaaatacttctaatataaatcaatttagcaaagatatagaaaaaatcaatttagctaaa
gaagaaaaaggcaaattagaagctgaaaaattagaatacactaataaaaattcaaaacta
aataccttaagtaataatattaatcaatggaatataaattataaaaaacatttaactgaa
agaattatgtttaaaaaattagaagagcagtttaataaagaaaaatcgcaaactgagagc
ttagaagatacattaaggaaaagtcaggcagggttaattgctttaggattagaagacggg
gtttgctgccctgtgtgtggatcatctaatcatcccaaattagcaaaattagcaaatagt
gaaataactgaagagtatgtaaataatagtaaagattcactagaaaaaataagagaggta
aaagaaaataaactaacagagttaacagatattaattctaccttaaaatctataaaagag
aattctatagatatactatctactgaactgctaaataaagagttacttaataataatcaa
gtaactgaggctcaatatgaaaatttacaagaaataaaagttgaagtaatagctcttata
aataataataattttgttttattagaacttaaaagtaaaatcgaaatattaaataatatt
attataaaagagaatcataaaataaatgaaaaacaaagaagagaaaaagataatgaatta
ttaagagaagaattaaaagttagaaatgcggaatatattcttaatgaaggaagtttaaga
gttctaattaataacctagataatattaaaaatgaatttaaaggtgaaatgagaacttta
aaagaattagatattattgaaaatagtttaactataaaaataagaaaacttaaaagtgat
tatgatgaatctgaaaagatttttaacatctcaaaaactttactagatcaagaaatgggt
agctataagaaagctaagcaagttagaaatttggcagaggaagagttaaaagaagcttta
acaatatttaaagaaaaagttttagatttaggatttgaaaattataaggattataaacta
tgtatgttattagaacttgaaatagctagtttaaataaagaaattaataatttcaattct
aaattagcagcaacacaaaaattatacgaagtttccttaaaggacgttcatggaaaagta
atagttgacttaacaataattaaaggtaaattaaatgaagaaattaataataggatagag
ttattggaaaaaagcaaagaattattttctagaataagaaataattcttcagtaattgaa
ctatgtgaaaaatataataaggaaatagaaatagatgaaaaggaatataaaactgtaggg
aagctttctaatattattaatggagataaccctaagaaaataagttttgaaagatatgtt
ctagctgcatattttgaggatataattaaggcctcaaatattagatttaataagatgact
tcaaatagatttgaacttctaagaaaacaaattgtaggagatatgagaaaaggtcaaggg
ttagaccttgaagtatttgataactatacaggaaaatcaagagatataaaaacactatct
ggaggagaaagttttaaggcatctttagcaatggcacttggacttgcagacatagttcaa
gcacatgctggaggaattcaactagatacaatgtttatagatgaagggtttggaaccttg
gatccagaatccctagataatgccatagaatgtttaatagaccttcaaaatgacggtaga
ttagttggtgtaatatctcatgtagaggaattaaaagaaagaatagatgcaagattagaa
ataagcttaacaaacaaagggagcaaagctcaattcaaagtttaa
DBGET
integrated database retrieval system