Clostridium gasigenes: J1C67_15820
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Entry
J1C67_15820 CDS
T07299
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
cgas
Clostridium gasigenes
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA
PAS_8
AAA_5
AAA_2
GAF_2
GAF
Mg_chelatase
PAS_7
PAS
GAF_3
AAA_16
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QSW18992
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Position
CGAS001:complement(3379488..3381227)
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AA seq
579 aa
AA seq
DB search
MKINFADIKVVINKYAVLLSDLLRVDVEIVDNNLIRIAGTGIYEGRIGENITDQGYVYKK
ALDTGETLVIEDPGQDILCAECKKRGNCIELMEICVPIKYGETTFGVIGLVCSTESQKES
LKSNLTIMIKFLEQIAEFISIKLIEQNQILENENSIKFFKEIINSIDDGVITVDREYKII
NINNRALKLFKLKPNVLGCKISIYETDEYTPKGYIYNFSIDNKEFKIIGKVVNNYINNKE
CNKIIIFKELVNVEEDGKKNNINCDSIVGQAQLLVDLKNRIKKISYADATTLITGESGTG
KELVARAIHSEGNRKNMPFIAINCGAIPENLLESELFGYVNGAFSGASAGGRIGKFELAN
NGVIFLDEIGDMPLYLQVKILRVLQERTIVKIGSNKLINLNIRVIAATNKNLKKLVNEGK
FRADLYYRLNIIPMEVPSLRERGDDVVLLTKMLVEKYNLRCNKYIHTIDKELIEIFKVYS
WPGNIRELENLVEFLVSLSGENGVIEKSMLPISFVQSYTEEIKNKSEEVYPDDDIIELKE
IERRYIKKALDKYGNSTEGKIKASKKLGIGIATLYRKIE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaattttgctgatataaaagtagtaataaataaatatgcggtattattatca
gatttgttaagggtagacgtggaaatagttgataataacttaataagaattgctggaact
gggatttatgaagggcggattggagaaaatataacggatcaagggtacgtatataaaaaa
gctttagatacaggagaaactttagtaatagaagatccaggacaagatatattatgtgct
gaatgtaaaaaaagaggtaattgtattgaacttatggaaatatgtgtacctattaaatat
ggagaaactacatttggggtaataggtcttgtgtgttctactgaaagtcaaaaagagagt
ttgaaaagtaatttaactattatgattaaattcttagaacaaatagctgaatttatttcg
attaagttaatagagcaaaatcaaatattagaaaatgaaaatagcattaaatttttcaaa
gaaataataaactcaatagatgatggcgtaataactgtagatagagaatataaaattata
aatataaataatcgagccttaaaattatttaagttaaagccaaatgttttaggttgtaaa
attagtatatatgaaactgatgaatatacgcctaaaggatacatatataattttagtatt
gataataaagaatttaaaattataggaaaagtagtaaataattatattaataataaagaa
tgtaataaaataattatttttaaggaattagttaatgttgaagaagatgggaaaaaaaat
aatataaactgtgattcaatagttggacaagcacagcttttagtggatttaaaaaataga
ataaagaaaatttcatatgctgacgctacaaccttaattacaggggaaagtggtaccgga
aaagagttagtagctagggcaatacattcagaaggaaatagaaaaaatatgccgtttata
gctataaactgtggagctattccagaaaatctattagaaagtgaactttttggatatgtt
aatggagcattttcaggagctagtgcaggtgggcgaatagggaaatttgaacttgctaat
aatggagttattttcttagatgaaatcggtgatatgcctttataccttcaggttaagatt
ttaagagtattacaagaaagaacaattgtaaaaataggttctaataaattaataaatcta
aatataagggtaatagcagctactaataagaatttaaagaaactagttaatgaagggaaa
tttagggcagatttatattataggctaaatataattcctatggaagttccgagtttaaga
gaaagaggagatgatgtggtactactaactaaaatgttagtagaaaaatataatttaagg
tgcaataaatatatacatactatagataaagaattaatagaaatatttaaagtatatagc
tggccaggtaatataagagaattagaaaatttagtggaatttttggtgagtttatcagga
gaaaatggagtaattgagaaatcaatgttaccaatatcatttgtacaaagttatactgag
gaaattaaaaataaaagtgaagaagtatatcctgatgatgacataattgagttaaaagag
attgaaagaagatatataaaaaaagctttggataagtatggaaattctacagagggtaaa
ataaaagcatcaaaaaaattaggaataggaatagctactctttatagaaaaatagaatag
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