Clostridium gasigenes: J1C67_16930
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Entry
J1C67_16930 CDS
T07299
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgas
Clostridium gasigenes
Pathway
cgas03420
Nucleotide excision repair
cgas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J1C67_16930
03430 Mismatch repair
J1C67_16930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_16930
Enzymes [BR:
cgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J1C67_16930
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J1C67_16930
MMR (mismatch excision repair)
Other MMR factors
J1C67_16930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
PhoH
SLFN-g3_helicase
DEAD
ResIII
Catalase_C
NPHP3_N
Phage_int_SAM_5
NB-ARC
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QSW19197
LinkDB
All DBs
Position
CGAS001:3613616..3615793
Genome browser
AA seq
725 aa
AA seq
DB search
MLIGKDILDEEKYLESTIDTVKELLNKYVDSSEVQDKEIIKHRKFLWDNRSELDEIEINE
NCGQVALQEQMYSNKITRMRTLEKQLKSPYFSRLDFRQNGEDIESFYIGLSSVEDEKDYN
FLVFDWRSPVSTMFYDFEVGPAFYEAPGRRINGEIEFSRQFNIKNGEIVFMHSSDESLCD
DSLTSMLGGNATDKMKNIVATIQKEQNDIIRNDDSRILFIQGAAGSGKTSIALHRSAYLL
YKHRKDLKADNILIFSPNQVFSEYISDVLPELGETNILQTTFELYSKTFLPSNYIYESKN
EHLDYIYSKCEDIDLFNLEAKSMEYKNTNEFMAVLNKFAPSIPELITDFKPIFIDDKQIV
SKQNVSKAFLERFNNIPFLSRIEVVKQSLFSQVETKYLSSDDNSHFDYVEDKRNFYDYCK
EQVDIQVDAMIKTLNHVEIYKILWDNIKKFTNKDLISIKDITLEYLNCGKVKYEDITPII
YIRASMEGFRNYSNVRHILIDEAQDYSPLFYEIIKKSFSNASITIMGDLNQRIDKHSNVN
NKEDILGVFPNIKTVALTKCYRSTYNITNFTKDILDTHEPIEAVDRKGDNPTIHITTDNL
ELNITNIINEMKAKNYTSIAVICKNKANCEFIYNKLKQKDPSVNIIDSDASEFKLGINVI
SSYLAKGLEFDGVIVADGENYLFDLDKNLFYTVCTRALHELHVFSTKPLDPVLPKDKSLY
SLLTY
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcttattggtaaagacattttagatgaagaaaaatacttagaatcaactattgatact
gttaaagaattgttaaataaatatgttgattcaagtgaagtgcaagacaaggaaataatt
aaacatagaaaatttctttgggataatagaagcgaactagatgaaattgaaattaatgaa
aactgtggccaagtagcccttcaagaacaaatgtattctaataaaataactagaatgaga
actcttgaaaaacaacttaagtcaccttatttctctagattagattttagacaaaatgga
gaggatatagaaagtttctatattggtttatcaagtgttgaagatgaaaaagactataac
tttttagtatttgattggcgttcaccagtttcaactatgttttatgattttgaagttggc
cctgctttttacgaagctcctggtagacgaataaatggtgaaattgaatttagcagacaa
tttaatataaaaaatggtgaaatagtatttatgcatagctctgatgaatcattatgtgat
gactcattaacctcaatgcttggaggaaatgctactgataaaatgaaaaatatagtagct
actatccaaaaagaacaaaatgatattattagaaatgatgatagtagaatattatttatt
caaggggctgcaggttctggtaaaacatctattgcattgcatagatctgcttatctttta
tataaacatagaaaagatcttaaagctgataatattttaatctttagtccaaaccaagtg
ttttctgaatatatttctgatgtattacctgaacttggcgaaactaatattcttcaaact
acatttgagttatattcaaaaacatttttaccttcaaactatatatatgaaagtaaaaat
gagcatttagattatatttattcaaaatgtgaagatatagatttatttaatttagaggct
aaatctatggaatataaaaatactaatgaatttatggcagtattaaataaattcgctcca
agtatacctgaacttataactgactttaagcctatatttatagatgataaacaaatagta
agcaagcaaaatgtctctaaagctttcttagagaggtttaataatattcctttcttaagt
agaattgaagttgttaaacaaagtttattttctcaagtcgaaactaaatatttatcatca
gatgataattctcactttgactatgtagaagataaaaggaatttttacgattattgcaaa
gagcaggttgatattcaagtagatgcaatgattaagacattaaatcatgtagaaatttat
aaaatactttgggataatattaaaaagttcacaaataaagatttaatatctataaaagat
attacattagaatatttaaattgtggaaaagtaaaatatgaagatattactccaataatt
tatataagagcatcaatggaaggctttagaaattacagtaatgtaagacatatacttatt
gatgaagcacaagattatagtcctcttttctatgaaataattaaaaaatcattttcaaat
gcatcaattacaattatgggagaccttaaccaaagaattgataagcattctaacgttaac
aataaagaggatatattaggtgtattcccaaatattaaaacagtagctttaactaagtgt
tatcgctctacatataatataactaatttcacaaaagatattttagatactcatgaacct
attgaagcagttgatagaaaaggtgacaacccaactattcatattacaactgataattta
gagttaaatatcacaaatattattaatgaaatgaaagctaaaaattatacatcaatagct
gtaatttgtaaaaacaaagctaattgtgaatttatatataacaagctaaaacagaaggat
ccttctgttaatattatagatagtgacgcttctgaattcaaacttggaattaatgttata
tcttcttatttagcaaaaggattagaatttgatggtgttattgtagctgatggagaaaat
tatttatttgatttagataagaacttattctatacagtttgtacaagagctttacatgaa
cttcatgtattctctactaaaccattagatcctgttcttcctaaagataaaagcttatat
tcattattaacttattaa
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