Clostridium gasigenes: J1C67_17070
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Entry
J1C67_17070 CDS
T07299
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cgas
Clostridium gasigenes
Pathway
cgas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1C67_17070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgas03019
]
J1C67_17070
03016 Transfer RNA biogenesis [BR:
cgas03016
]
J1C67_17070
Enzymes [BR:
cgas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J1C67_17070
Messenger RNA biogenesis [BR:
cgas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J1C67_17070
Transfer RNA biogenesis [BR:
cgas03016
]
Prokaryotic type
tRNA degradation factors
J1C67_17070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
QSW19222
LinkDB
All DBs
Position
CGAS001:complement(3648545..3650674)
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AA seq
709 aa
AA seq
DB search
MNNMLKTNIAGREMKIEFGNIGKLSNVAMFMSYGDTVILTNVNASEKPRAGIDFFPLSVE
YEERLYSVGKIPGGFIKREGRPSENSILAGRAVDRPLRPLFPSGYRNDVQVVCTVVSVEK
DNAPEILATNAASMALCLSSIPFTTPVATVMVGLIDGNFILNPTSAERELSQMELTVCTT
SERVMMIEAGGNEIPEEVMINAIKFGFESAQAIIKFQEEAVAKFGKVKMTPDYYKPDADF
KAEVEAFAKAMVKEAMWITDKDARNAAMDIVNAKVAEEFNEKYADKLSDLKEIMYNMQKY
VVRDMLLNHRRRPGGRDFDKVRQIDCEVNILPRTHGTGLFTRGLTQVLTVATLGSVGDFQ
ILDGISGKDSKRYMHHYNFPAYSVGEVRPLRGPGRREIGHGALAERALVPLIPSEEDFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPLKRPAAGIAMGLITSDDLTKEEVLTDI
EGIEDFFGDMDFKVAGTTEGITSIQVDTKIAGLSFTIIENAINGARTARLLILDKINACL
PAPRSEVSLHAPKTVTININPEKIRDVIGAGGKIINKIIAETGVKIDIKEDGSVFVSSPE
HEGVDKAIKIIEGIVKEAKVGEIYLGKVIKIAAFGAFIEILPNKEGLCHISKLARERVNK
VEDVVAVGDEILVKVTEVDNQGRINLSRKDALPEEVEEVKEVKEVSDKE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatgttaaaaactaatatagcaggaagagaaatgaagattgagtttggtaac
ataggaaagttgtcaaatgttgcaatgttcatgagttatggagatactgtaatattaact
aatgttaatgcttcagaaaaaccaagagcaggtatagatttctttccacttagcgtagaa
tatgaagaaagattatattcagtaggaaaaatacctggtggatttataaaaagagaagga
agaccttcagaaaactctattcttgcaggaagagctgttgatagacctttaagaccttta
ttcccaagtgggtacagaaatgacgtgcaagttgtttgtacagtagtatctgtagaaaaa
gataatgcaccagaaattttagcaacaaatgcagcatctatggcattatgtttatcaagt
attccgttcacaacacctgttgcaacggtaatggtagggcttatagatggaaactttatt
ttaaatccaacatcagcagaaagagaattaagtcaaatggaattaactgtttgtacaact
agtgaaagagtaatgatgatagaagctggtggaaacgaaattcctgaagaagttatgata
aatgcaataaagtttggttttgaaagtgctcaagcaataattaaattccaagaagaagca
gtagctaaatttggaaaagttaaaatgacaccagattattacaaaccagatgcagatttt
aaagctgaagttgaggcttttgcaaaagctatggttaaagaagcaatgtggataactgat
aaagatgcaagaaatgcagctatggatattgtaaatgcaaaggttgcagaagaatttaat
gaaaaatatgcagataaattaagtgacttaaaagaaattatgtacaatatgcaaaagtat
gttgttagagatatgttactaaatcatagaagaagaccaggtggaagagattttgataaa
gttagacaaatagattgtgaagtaaatatacttccaagaactcacggtacaggattgttt
actagaggattaactcaagtattaacagtagcaacattaggttcagttggagatttccaa
atattagatggtattagtggtaaagattcaaagagatacatgcatcactataacttccca
gcttattcagtaggagaagtaagaccactaagaggacctggtagacgtgaaataggtcat
ggtgcactagctgaaagagctttagtaccactaattccttcagaagaagacttcccatac
actattagattagtatcagaagtattaagttcaaatggatcaacttcacaagcttcagtt
tgtggtagtacacttgctctattagatgctggagtgcctcttaagagaccagctgcaggt
attgcaatgggacttataacttcagatgatctaactaaagaagaagttttaactgatatc
gaaggtatagaagatttctttggagatatggactttaaggtagcaggtactactgaagga
attacttccattcaagtagatactaaaattgcagggttaagctttactattatagaaaat
gctattaacggtgcaagaactgcaagacttcttatcttagataagataaatgcatgtctg
ccagcaccaagaagtgaagtttctcttcatgctcctaaaacagtaacaataaacatcaat
ccagaaaaaataagagatgtaattggagctggtggaaagattataaataaaattatagct
gaaactggagttaagattgatattaaagaagatggttcagtattcgtatcatcaccagaa
catgaaggtgtagataaggctataaaaatcattgaaggtatagtaaaagaagctaaagtt
ggagaaatttacttaggtaaagtaattaaaattgcagcttttggtgcctttatagaaata
cttcctaataaagaaggcttatgccatatttctaagttagctagggaaagagtaaacaag
gttgaagatgttgttgcagttggagatgagattttagttaaagtaactgaagtagataac
caaggaagaataaatctttcaagaaaagatgctctaccagaagaagtagaagaagtaaaa
gaagtaaaagaagtatcggataaagaatag
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