Clostridium gasigenes: J1C67_17085
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Entry
J1C67_17085 CDS
T07299
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cgas
Clostridium gasigenes
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgas03016
]
J1C67_17085 (truB)
Enzymes [BR:
cgas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J1C67_17085 (truB)
Transfer RNA biogenesis [BR:
cgas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J1C67_17085 (truB)
Prokaryotic type
J1C67_17085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QSW19225
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All DBs
Position
CGAS001:complement(3652186..3653064)
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AA seq
292 aa
AA seq
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MNGVINVFKNKGMTSFDVVRKIKKIANTGKVGHTGTLDPEATGVLPICIGRATKIIDYIM
NSEKVYVVEFKLGVKTTTYDLEGDITEEMDPTHLSYEEILKAVNDFKGGYLQVPPMYSAL
KQNGVRLYTLARQGIEVEREGRPITIYNIEDIEINNPYVKMKVTCSKGTYIRSLCYDIGE
VLNVGATMSDLKRSKTSVFEEGESINIEDLTEENIGNYIISIEEALQMYSKLTVSNDYTK
LLINGVRLCDNRFTKDTVIIDKLYRVYDEDDNFIGLGKKDDRGFKIQKLLNN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggtaattaacgtatttaaaaacaaaggaatgacttcctttgatgtggtaaga
aaaattaaaaagattgctaatacaggtaaggttggacatacagggactctagacccagag
gctactggtgttctgcctatttgtattggaagagctactaaaataatagattatataatg
aattcagaaaaggtatatgttgtagagtttaaactaggagttaaaactactacttatgat
ttagagggagatattactgaagagatggatcccacacatctaagttatgaggaaatatta
aaggctgtaaatgattttaaggggggataccttcaagtacctccaatgtattctgcactt
aagcaaaatggagttagactttatactcttgcaaggcaaggtatagaagttgaaagagaa
ggtagacctataacaatttataatatagaagatattgaaataaataacccttatgtaaag
atgaaagttacttgctcaaaaggaacatatataagaagcttatgttatgatattggtgaa
gtcttaaatgttggagcaacaatgtcagatcttaaaagaagtaaaacatctgtttttgaa
gagggagaatcaataaacattgaggaccttacagaagaaaacattgggaattatatcatt
tcaatagaagaagcattacaaatgtatagcaaacttacagtaagcaatgattatacaaaa
ctattaataaatggtgttagactttgtgataatagatttacaaaggatacagttataata
gataagctttatagagtttatgatgaagatgataactttataggccttggtaaaaaagat
gaccgaggatttaaaatacaaaagctattaaataattag
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