Corynebacterium glutamicum ATCC 13032 (Bielefeld): cg0889
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Entry
cg0889 CDS
T00244
Name
(GenBank) PUTATIVE DNA HELICASE RECQ
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgb
Corynebacterium glutamicum ATCC 13032 (Bielefeld)
Pathway
cgb03420
Nucleotide excision repair
cgb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
cg0889
03430 Mismatch repair
cg0889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgb03400
]
cg0889
Enzymes [BR:
cgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
cg0889
DNA repair and recombination proteins [BR:
cgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
cg0889
MMR (mismatch excision repair)
Other MMR factors
cg0889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
HHH
C1_1
Motif
Other DBs
NCBI-ProteinID:
CAF19484
UniProt:
Q8NSA0
LinkDB
All DBs
Position
820727..822763
Genome browser
AA seq
678 aa
AA seq
DB search
MINLQDLDEDQRIAASAPRGPVCILAGAGTGKTRTITYRIAHLIDQGFVSPNRVLAVTFT
SRAAGEMRHRLNLMGIGGVQARTFHAAARKQLLYFWPQVAGNLPWRLLDNKFQLVGRAVR
GARLESQTEKVRDILGEIEWAKASLITPEQYPDRLGTRTPPAPAEKIAEVYQRYENMKAT
PEGMLLDFDDLLLHTAGALENSPAVAEEFRQQYRSFVVDEYQDVTPLQQRVLDAWLGDRD
DLTVVGDANQTIYSFTGATPEFLLNFSRKYPEATVVKLQRDYRSTPQVTALANTVIGQAR
GRVAGTRLELQGMRIAGPEPEFSAFDDEPTEAREVAGRILTLLKNGVQASEIAVLYRINA
QSAVFEQALADAGIVYQVRGGEGFFTRPEIRQALSQLIRTSQRDVDESDLVRLTQRTLVP
LGLSSEEPSGAQERERWQSLNALVDLVKDLVKATPDLDLTGLLLKLRERQEAKHPPTVEG
VTLASLHAAKGLEWDAVFLVGLVDSTLPISHAIKSGDEAIEEERRLFYVGVTRAREHLHC
SWALARQEGGRKSRKRSRFLDGIVVEMASESGTPRSNRPKNCRVCGSVLSSPAEKAVGRC
ASCPIQADERVFEQLRTWRNDTAKRENKAAYMVFSNATLMAIAEMNPTNENELLSVPGVG
PMKIENYGDDVLAILGAL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaatttgcaggacctcgacgaggatcaacgcatcgctgcttctgcgcctcgcgga
ccagtgtgcattctcgccggagccggcacgggtaaaactcgaacgattacttatcgcatc
gcgcatctgattgatcagggttttgtgagcccgaatcgtgttcttgctgtgacgtttaca
tcccgcgcggcaggggagatgcgtcatcgcttgaatctcatggggatcggtggcgtgcag
gcaaggacattccacgcagcagcgaggaagcagttgttgtatttctggcctcaggtggcg
ggtaatctgccgtggcgcctgttggataataagtttcaacttgtgggtcgtgcggttcgt
ggtgcgcggttggaatcgcagactgaaaaagttcgcgatattttgggtgaaattgagtgg
gcgaaggcgtcgttgattacacctgagcagtatccggatcgtttgggtacgaggacccct
ccggcgcccgcggagaaaatcgctgaggtgtatcagcgatacgaaaacatgaaggcaacc
cctgaggggatgttgcttgatttcgacgatctgttgcttcacaccgccggcgcgttggag
aattccccggcggtggcggaggagttccgccagcagtatcgcagctttgtggtcgatgag
tatcaggatgtgacgcctctgcagcagcgggtgctcgatgcgtggctcggcgatcgcgat
gacctgacggttgtcggcgatgcgaaccagacgatttattcgttcacgggggcaacacct
gaatttttgcttaatttctcgaggaaatatccggaggcaaccgtcgtcaagctgcagcgc
gactaccgctcaacgccgcaggtcaccgcgctggccaataccgtcatcggccaggcgcgg
gggcgcgttgctggcacgcgcctggagcttcagggaatgcggatcgccgggccggagccc
gaattttcggctttcgacgacgaacccaccgaagcccgcgaagttgcgggccgcattttg
acgctgcttaaaaacggcgttcaggcctcagaaatcgccgttttgtaccgcatcaacgcg
cagtcggcggttttcgagcaagcgcttgccgacgccggcatcgtatatcaggtgcgcggc
ggcgaaggctttttcacccgcccagaaattcgccaagccctgagtcaactgatccgcact
tcccaacgcgacgtcgatgaaagcgatctggtgcgtctgacgcaacgcacactcgtgcca
cttgggttgagttcggaagagcccagcggtgcccaagagcgggaacgctggcaatcgctc
aacgctttagtcgatctggtgaaagaccttgttaaagccacaccagatttggatctcaca
ggcttgctgctgaaacttcgggaacgccaagaggcgaagcatccgccgaccgtcgaaggt
gtcaccttggcatcgctacacgcggcgaaaggcctcgaatgggatgcggtgtttcttgtc
ggacttgtcgattccacgttaccgatcagccacgccattaaatctggcgatgaagcaatc
gaagaggaacgtcgcctgttctatgtcggtgtgacccgtgcccgcgaacacctccactgc
agttgggcactcgcgaggcaagaaggcggacggaaatcgagaaagcggagtcgattcctc
gatggcatagtcgtggagatggcctccgaatcgggcacacctcgcagcaatcgtccgaaa
aactgccgagtgtgcggatcggttctttcaagccctgccgaaaaagctgtcggtcggtgt
gcgagttgcccgatccaagcggatgaacgagtcttcgaacagctgcgaacgtggcgcaat
gacaccgcgaagcgcgaaaacaaagcggcgtacatggtgttcagcaatgcaacgttgatg
gcgatcgctgaaatgaaccccaccaacgaaaacgaattgctcagcgtgccgggtgtgggg
ccgatgaagatcgagaactatggcgatgacgtgctcgcgattttgggagcactttag
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