KEGG   Corynebacterium glutamicum ATCC 13032 (Bielefeld): cg0968
Entry
cg0968            CDS       T00244                                 
Name
(GenBank) PUTATIVE ATP-DEPENDENT HELICASE
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cgb  Corynebacterium glutamicum ATCC 13032 (Bielefeld)
Brite
KEGG Orthology (KO) [BR:cgb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgb03400]
    cg0968
Enzymes [BR:cgb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     cg0968
    5.6.2.6  RNA 3'-5' helicase
     cg0968
DNA repair and recombination proteins [BR:cgb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    cg0968
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_3rd_Lhr DEAD WHD_4th_Lhr WHD_2nd_Lhr Helicase_C ResIII AAA_25 DUF6406 PhoH Thiolase_C
Other DBs
NCBI-ProteinID: CAF19552
UniProt: Q8NS36
LinkDB
Position
901514..906076
AA seq 1520 aa
MAKSILSRFRPQVAEWFRDVFASPTPVQEGTWEAVSKGKNALVVAPTGSGKTLAAFLWAL
DSLTEQTGQQVLDTGTPVPVRGGKVKVLYISPLKALGVDVENNLRAPLTGIARTASRMGL
DVPNITVAVRSGDTPSAERARQVRKPPDILITTPESAYLMLTSKAGATLSDVDVVIIDEI
HAMAGTKRGVHLALTLERLEKLVGRPVQRVGLSATVRPLETVAGFLGGGRPVEIVAPPAE
KKWDLTVTVPVEDMSDLPVQEPGSTIGELVMDDPLGITGESALPTQGSIWPHIEQQVYNQ
VMSAKSTIVFVNSRRSAERLTSRLNEIWAMEHDPESLSPQLRRDPAQIMSSADVAGKAPQ
VIARAHHGSVSKDERATTETMLKEGRLRAVISTSSLELGIDMGAVDLVIQVESPPSVASG
LQRVGRAGHTVGATSIGSFYPKHRSDLVQTAVTVQRMKEGLIEEIHVPKNALDVLAQQTV
AAVSIKDVQVDEWYETIRKAYPYRDLAREVFDSVIDLVSGVYPSTDFAELKPRVVYDRVS
GVLEGRPGSQRVAVTSGGTIPDRGMFGVFLVGDGPRRVGELDEEMVYESRVGDVFTLGAS
SWRIEEITRDQVLVTPAPGHTGRLPFWTGDAAGRPAELGKALGAFRRSTLTDPSSSGLEG
WAHDNLIAFLQEQEESTGVLPDEKTLVLERFKDELGDWRIVLHTPYGRGVNAAWALAVGA
KIAEETGMDAQAVAGDDGIVLRLPEGDEDPSAALFMFEAEEIETLVTEQVGNSALFASRF
RECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRECLQDVYDLPA
LKNLIEDLQLRKVRIAEVTTQQPSPFASALLFNYTGAFMYEGDSPLAEKRAAALALDPAL
LAKLLGEVELRQLLDPDIIAEVHQQLRRQGDRAARNNEELADSLRILGPIPLDELGEHIT
FENPDLEDRAMTVRINGREHLAQVLDAPLLRDALGVPVPPGVPAQVETITDALEQLVNRW
VRTRGPFTANDLAEAFGLGIATAITALQSAPVIEGRYRQGVDVQEYCATEVLSIIRRRSL
AAARKQTRPVSQSAFARFLLDWQQIAPVGATPELRGVDGTYTVIEQLAGVRLPASAWEDL
VLPRRVADYSPIHLDELTSNGEVLIVGAGQAGSRDPWISLLPVDYAAQLVGEASTSMSPL
QDAVLDQLRAGGAFLFSDILEENFGYTTAQLQEAMWGLVEAGLVSPDSFAPIRARLASGT
TAHRAKRRPARSRLRTRTSFASDVPPDMRGRWTLSVQPADATSRSVAHGEGWLDRYGVLT
RGSVVAEDIVGGFALAYKVLSGFEESGKAMRGYFIEGLGAAQFSTPAIIDRLRGHDDSPD
VEGWPSGATDPDVYLIAAADPANPYGAALPWPEQGPSRAAGAMVVLCDGLLLAHLTRGGR
TLTVFSDNIPKIATALITYERLTVEKINGDNVFDSPLLEQFRKHGATITPKGMRFRPPVA
RETPSDTLPTRTFRGGFGRR
NT seq 4563 nt   +upstreamnt  +downstreamnt
atggctaaaagcattctttcccgattccgacctcaagtagcggagtggttccgggatgtc
tttgcatctccgacccctgttcaggagggaacgtgggaggcggtatctaaggggaagaat
gccctcgtggtggcgccgaccggtagtggtaaaaccttggctgcgtttttgtgggcgtta
gattccctcactgaacaaacaggtcaacaggttttagacacgggaacaccggtgcctgtt
cgtggtgggaaagtgaaagtgctctacatttccccactcaaagcgcttggcgtggatgta
gaaaataatctgcgtgcaccgttgaccggtattgcgaggactgcctctcggatgggtttg
gatgtgcccaatatcactgtggcggttcgttcgggtgatacgccatcggcggagcgggcc
cggcaggtgcgtaagcctccagacattttgatcaccactccggagtcggcgtatttgatg
ttgacctcaaaagcgggggcgaccctttcggatgttgatgtggtgatcatcgatgaaatc
cacgccatggccggaaccaaacggggagtgcatctggcgttgacgctggagcgtttggaa
aagctcgtggggcggcctgtgcagcgagttggtttgtctgcaacggtgcgtcctttggaa
acggtggcgggtttcttgggcggtggcagacccgttgagattgtggctccacctgcggag
aaaaagtgggatctcactgtcactgtgccggtggaagacatgtcggatttgccggttcag
gagccgggatcaactattggtgaactagtcatggatgatccgttggggattactggcgaa
tcagcgctgcctactcaaggctcgatttggccacacattgagcagcaggtgtacaaccag
gtgatgtcggcgaaatcgaccatcgtgtttgtaaattccaggcgttccgcggagcgttta
accagtcggttgaatgaaatctgggcgatggaacacgatccggaatcgctgtcgccgcag
ctgcgaagagatccggcgcagattatgtcgtcagcggatgtggcaggaaaagcaccacag
gtgatcgcacgtgcgcaccacggatccgtatccaaagatgaacgtgccaccaccgaaacc
atgctgaaggaaggtcggttgcgcgcagttatttccacctcctcgctggagttgggcatt
gatatgggtgccgtggacctggtgattcaggtggaatcgccaccgtccgtggcaagtggc
ctgcagcgcgtggggcgtgcggggcacacggtgggggcgacgtcgataggctccttttat
cccaagcaccgctccgacttggtgcaaaccgcggtgaccgtgcagcggatgaaggaaggg
ctgatcgaagagatccacgtgcccaaaaacgcgcttgatgtactggcacagcagacggtg
gcggctgtctcgattaaagatgtgcaggtcgatgagtggtacgagactattcgcaaggcg
tatccgtaccgggatttggcgcgcgaagtcttcgattccgtcatcgacctggtcagcggt
gtgtatccctccacagattttgccgagctgaagccacgtgtggtgtacgaccgggtttca
ggcgtgctggagggccggccaggatcccaacgcgtagcagtgaccagtggcggaacaatt
cccgatcgaggaatgttcggagtcttcctcgtcggcgatggtccccggcgcgtcggcgag
ctcgatgaggaaatggtctacgaatcccgcgtgggcgatgtgtttacgctcggggcgtcg
agttggcggattgaagagatcacccgcgaccaggtactggtcactcccgcgccgggtcac
acgggtcggctgcctttttggacgggcgatgccgcaggccggcccgctgagctgggtaaa
gctttaggcgcttttcgacgctcgaccctcaccgatccatccagctccggcttggaaggc
tgggcgcacgacaacctgatcgcctttttacaggagcaggaagaatccaccggtgtgttg
ccggatgagaagacgttggtgttggagcgtttcaaagatgaactaggcgactggcgcatt
gtcctgcacactccttatggacgaggagtaaacgcagcatgggctttggccgtcggggcg
aaaatcgctgaagagaccggcatggatgcgcaagccgtggcaggtgatgatggcattgtg
cttcggttgccggaaggggatgaagatcccagcgcagcgttgtttatgtttgaggcggaa
gagatcgaaacgctagtgacagagcaggtgggtaactctgcgctgtttgccagcaggttc
cgtgaatgcgccgcgagggccctattgctgccgagacgaaaccccggcaagcgcgcaccg
ctgtggcagcaacgacaacgagcagcacagcttcttgatgtggccagaaagtacccgagt
ttcccgatcattttggaaacagtgcgcgaatgtcttcaagatgtttacgatctgcccgct
ctgaagaatctcattgaggatctacagctgcggaaggtaagaatcgcggaagtcaccacc
cagcagcccagtccttttgcctccgcattgctgttcaattacaccggtgcattcatgtac
gaaggcgacagcccgctcgcagagaaacgtgccgcagcgttggccctggatccggcactg
ttggcgaaattgctgggtgaggtggagcttcgacaattactggatcccgacatcatcgca
gaagtgcaccaacaattgcgcaggcaaggcgatcgtgcggcgagaaacaatgaagaactc
gcagattctttgaggattttaggaccgattcctttggatgaattgggcgaacacatcacc
tttgaaaacccagacctggaggatcgagcaatgactgttcggatcaacggtcgggaacat
ttagcgcaggtcttggatgcacctttgcttcgagatgccttaggtgttcccgtaccgcct
ggtgtgcctgcgcaggtagaaaccattacggatgcgttggaacagttagtcaacaggtgg
gttcgtaccagagggccatttactgcgaatgatttggcagaagcctttggactgggcatc
gccacggcgatcaccgcccttcaaagcgcacctgtgattgaaggccgctaccgacaaggc
gtggacgtgcaggaatactgtgcgacagaagtgttgtcgatcataaggcgacgcagcctc
gcagcagcgaggaaacaaaccaggccggtatcgcaatcagcctttgcgcgattcctgctt
gattggcaacagatcgcaccggtgggcgccacacctgaactccgaggcgttgatggcacc
tacacagtcattgaacaactcgccggtgtacgtcttcccgccagtgcgtgggaagatctc
gtgttgccgcgccgggttgccgactattcaccgatccatctcgatgagctgacctccaat
ggggaagtcctcatcgtgggagcgggccaagccggaagccgcgatccgtggattagcttg
ctgcccgtggattatgcggcgcagttggtgggggaggcgtcgacaagcatgagcccattg
caggacgccgtgcttgaccagctgcgtgcgggaggcgccttcctgttttctgacattctc
gaagagaatttcggctacaccacagcccagctgcaagaagcgatgtgggggctggtggaa
gcaggcctggtcagccctgatagcttcgcgccgatccgcgcgcgcctagcgtcgggaacc
acggcgcatcgggcgaaacgtcgaccagcgagatcccggctgcgcacccgcaccagcttc
gcgagcgacgtgcccccagacatgcgcggacgatggacgctgtccgtgcaacccgccgac
gccaccagccgctccgtcgcacacggcgaaggctggctcgaccgctacggcgtgctcacc
cgcgggagcgtcgtcgccgaagacatcgtcggaggcttcgccctggcctacaaagtgctc
tccggcttcgaagaaagcggcaaagcgatgcgcggctacttcatcgaagggctcggcgcc
gcgcaattctccacgcccgccatcatcgaccgcctccgcggccacgacgattcccccgac
gtcgaaggctggccctccggcgccaccgacccagacgtctacctcatagccgccgccgac
cccgcaaacccctacggcgccgcacttccctggcctgagcaggggcccagccgcgccgcc
ggagctatggtcgtgctttgcgacggactcctcctcgcccacctcacccgcggcgggcgc
accctcaccgtgttctccgacaatatccccaaaatcgcgacagccctaatcacatacgaa
aggctcacggtagaaaaaatcaacggcgacaacgtcttcgactccccactcctggaacaa
ttccgcaaacacggcgccaccatcaccccgaagggaatgcgatttcgaccaccagtggca
cgggaaaccccctcagatacgcttcccaccaggacttttcgtggaggcttcggacggcgc
taa

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