Cyanobium gracile: Cyagr_0209
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Entry
Cyagr_0209 CDS
T02359
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cgc
Cyanobium gracile
Pathway
cgc00300
Lysine biosynthesis
cgc00470
D-Amino acid metabolism
cgc01100
Metabolic pathways
cgc01110
Biosynthesis of secondary metabolites
cgc01120
Microbial metabolism in diverse environments
cgc01230
Biosynthesis of amino acids
Module
cgc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cgc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Cyagr_0209
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cyagr_0209
Enzymes [BR:
cgc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Cyagr_0209
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFY27413
UniProt:
K9P369
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All DBs
Position
complement(200501..201925)
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AA seq
474 aa
AA seq
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MVTSASPATDPVAPVPAAPIAPGGPFEQGSDPLSPNRNLAPLTARLDALGRLEVGGCLLS
DLARTYGTPLYVLDEASLRTTCRAYREALAAHYPGEALALYASKANSSLAITALVASEGL
GLDAVSAGELLTALQGGMPAERIVFHGNNKSAEELQLAVDRGVTVILDNWNDIDLLATLA
AGRPAPVRVLVRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEAVLRHLAACPWARVDGLH
AHIGSQIFELEPHRDLAGVMAEALSLARSLGHPCGDLNVGGGLGIRYVGCDDPPSIQEWV
RVVATAVAEACGLRQLALPRLLCEPGRSLVATAGMTLYTLGSRKEIPGLRTYLSVDGGMS
DNPRPITYQSLYTAVLADRPLAETTEAVTVAGKHCESGDVLLHDVRLPLTSPGDVLAVFA
TGAYNAAMGSNYNRIPRPAAVLVHDGVAEVVQRREQPEDLLRYDVLPHRLLPVS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccagcgcctccccggcgaccgatccggtcgctcccgtccccgcggcgccgatc
gcccccggggggcccttcgagcagggaagtgatcccctcagccccaaccgcaacctggct
ccgctgaccgcccgcctcgatgccctgggccgcctggaggtggggggctgcctgctgagc
gatctggcccgcacctacggcacgccgctctacgtcctcgacgaggccagcctgcggacc
acctgccgggcctaccgggaggcgctggccgcccattaccccggggaggccctggccctc
tacgcgtccaaagcgaacagttccctggcgatcacggccctggtggcctccgagggtctc
ggcctcgacgccgtctcggccggggaactgctcacggccctgcagggcggcatgcccgcc
gagcggatcgtcttccacggcaacaacaaatcggccgaggagctccagctcgccgtcgac
cggggcgtgacggtgatcctcgacaactggaacgacatcgacctgctcgctaccctggcg
gccggacggcccgcgccggtgagggtgctggtgcggttcaccccgggcatcgagtgccac
acccacgagtacatccgcaccggccacctcgacagcaagttcggcttcgaccccgaccag
ctggaggccgtgctgcgccacctggccgcctgcccctgggcgcgggtggatggcctgcac
gcccacatcggctcccagatcttcgagctggaaccccaccgcgacctggccggggtgatg
gccgaggccctgtccctggcccgttccctcggccacccctgcggcgacctcaacgtcggc
ggcggcctcggcatccgctatgtgggctgcgatgatccgccgagcatccaggagtgggtg
cgggtggtggcgacggcggtcgccgaggcctgcggcctgcgccagctggcgctgccgcgg
ctgctgtgcgaacccggccgctccctcgtggcaacggcagggatgacgctctacacgctg
gggagccgcaaggagattcccggcctgcgcacctacctgtcggtggatggcggcatgagc
gacaacccgcggccgatcacctatcagtcgctgtacaccgcggtgctggccgaccggccg
ctggcggagaccaccgaggcagtgaccgtggccggcaagcactgcgagtccggcgacgtg
ctgctccatgacgtccgcctgccgctcaccagccccggagacgtgctcgccgtgttcgcc
accggcgcctacaacgccgccatggggtccaactacaaccgcatccccaggccggcggcg
gtgctcgtccacgacggtgtggccgaggtggtgcagcggcgcgagcagccggaagaccta
ctgcgctatgacgtcctgccccaccggctcctgccggtatcctga
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