Cyanobium gracile: Cyagr_0442
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Entry
Cyagr_0442 CDS
T02359
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgc
Cyanobium gracile
Pathway
cgc03030
DNA replication
cgc03430
Mismatch repair
cgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cyagr_0442
03430 Mismatch repair
Cyagr_0442
03440 Homologous recombination
Cyagr_0442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgc03032
]
Cyagr_0442
03400 DNA repair and recombination proteins [BR:
cgc03400
]
Cyagr_0442
Enzymes [BR:
cgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cyagr_0442
DNA replication proteins [BR:
cgc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cyagr_0442
DNA repair and recombination proteins [BR:
cgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cyagr_0442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AFY27634
UniProt:
K9P4Z5
LinkDB
All DBs
Position
457421..460951
Genome browser
AA seq
1176 aa
AA seq
DB search
MAFVPLHNHSDYSLLDGASQLPAMVQRAVELGMPALALTDHGVMYGAIELLKLCTKAGIK
PIIGNEMYVINGSIDDPQPKKERRYHLVVLAKNAVGYRNLVKLTSISHLRGMRGRGIFAR
ACIDKALLRQYSEGLMVATACLGGEIPQAILRGRPEVAREVASWYREVFGDDFYLEIQDH
GGVEDRIVNVEMARISAELGIPLVATNDAHYLTSNDVEAHDALLCVLTGKLISDEKRLRY
TGTEYIKSEAEMARLFADHLEPEVIAGAIATTAKVAEKVEDYDILGRYQMPRFPIPEGHT
PVSYLSEVSHQGLRDRLGIAADAAIDPAYGERLAFELQVMEQMGFPTYFLVVWDYIRFAR
ENGIPVGPGRGSAAGSLVAYSLGITNIDPVEHGLLFERFLNPERKSMPDIDTDFCIERRG
EVIDYVTRRYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYGEADRLAKLIPVARGKPAK
LAEMIGPESPVPEFREKYENDPKVRHWVDLARRIEGTNKTFGVHAAGVVIAAEPLDELVP
LQRNNDGQVITQYFMEDVEAMGLLKMDFLGLKNLTMIEKTIELVAQAEGERLDPDALPAN
DPGTYALLARGDLEGIFQLESSGMRQIVRDLKPSSLEDISSILALYRPGPLDAGLIPKFI
NRKHGREAIDVAHAKLEPILKETYGIMVYQEQIMRIAQDLAGYSLGEADLLRRAMGKKKV
SEMQKHRHQFVTGATERGVEAAIAEALFDQMVLFAEYCFNKSHSTAYGAVTYQTAYLKAH
HPVAYMAALLTVNAGTTDKVQRYIANCQAMGIEVMPPDVNASGIDFTPVGKKILFGLSAV
RNLGDGAIRQLIEARSSGGPFLHLADLCDRIPGQQLNRRAIESLIHCGALDGLEPKANRA
QLMADLDLVLDWASSRARDRASGQGNLFDLFGGGAAGASEGAAAVEAPAPPKAAPVADYP
PTEKLKLEKELLGFYISDHPLRQLASQVRLLTPIGLANLEEMADKAKVSVVVMVSEIRPV
TTRKGDRMAVLQLEDLTGACEAVVFPKSYARLADHLMVDARLLLWAGVDRRDDRVQLLVD
DCRSIEDLQLVMVELAPEQAGDIAVQHRLRECLTRHRPGQEEAGVRVPVVALVKHQDETR
FVRLGGQFCVADASAAVQTLASADFRAWLRSPLGSA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtggccttcgttccgctccacaaccacagtgactacagcctgctggacggggcctcccag
ctgccggcgatggtgcagcgggccgtggagctgggcatgccggccctggccctcaccgac
cacggggtgatgtacggcgccatcgagctgctcaagctctgcaccaaggcgggcatcaag
ccgatcatcggcaacgagatgtacgtcatcaacggctcgatcgacgacccccagccgaag
aaggagcgccgttaccacctggtggtcctggccaagaacgccgtcggctaccgcaacctg
gtgaagctcaccagcatcagccaccttcgcggcatgcgcggccgggggatcttcgcccgg
gcctgcatcgacaaagccctgctgcggcagtacagcgaagggctgatggtggccaccgcc
tgcctgggcggcgagatcccccaggcgatcctgcgcggtcgcccggaggtggcccgcgag
gtggcgagctggtaccgggaggtgttcggggacgacttctacctggagatccaggaccac
ggaggcgtcgaggaccgcatcgtcaacgttgagatggcgcggatcagtgccgagctgggc
attcccctggtcgccaccaacgacgcccactacctcaccagcaacgacgtcgaggcccac
gacgccctgctgtgcgtcctcaccggcaagctgatcagcgacgagaagcgactgcgctac
acgggcaccgaatacatcaagagcgaagcggagatggcccggctcttcgccgaccatctt
gagcccgaggtgatcgcaggcgccatcgccaccaccgccaaggtggcggagaaggtggag
gactacgacatcctcgggcgctaccagatgccccgcttcccgatccccgagggccacacg
ccggtgagctacctcagcgaggtgagccaccagggactgcgggaccggctggggatcgcc
gccgacgccgccatcgatccggcttacggggagcggctggcgttcgagctgcaggtgatg
gagcagatgggcttccccacctacttcctggtggtctgggactacatccgcttcgcccgc
gagaacggcatcccggtggggccgggccggggttcggccgccgggtcgctggtggcctat
tccctcggcatcaccaacatcgacccggtggagcacggcctgctgttcgagcgcttcctc
aacccggaacgcaagtcgatgcctgacatcgacaccgatttctgcatcgagcgccgcggc
gaggtgatcgactacgtcacccgccgctacggcgaggacaaggtggcccagatcatcacc
ttcaaccggatgacctccaaggcggtgctcaaggacgtggcccgggtgctcgacatcccc
tacggcgaagccgaccggttggccaagctgattcccgtggcccggggcaagcccgccaag
ctcgccgagatgatcggccccgaatcgcccgtgccggagttccgcgagaagtacgagaac
gatcccaaggtgcgccattgggtcgacctggcccgccgcatcgagggcaccaacaaaacc
ttcggtgtccatgccgccggggtggtgatcgccgctgaacccctcgacgagctggtgccc
ctgcagcgcaacaacgacggccaggtgatcacccagtacttcatggaggacgtcgaagcg
atgggcctgctgaagatggacttcctgggcctgaagaacctcaccatgatcgagaagacg
atcgagctggtggcccaggccgagggggaacggctcgaccccgatgccctgccagccaac
gatcccggcacctatgccctgctggcccggggcgatctggagggcatcttccagctcgaa
tccagcggcatgcgccagatcgtccgcgacctcaagccctcctccctggaggacatctcc
tcgatcctggccctctaccggcctggccccctcgatgcgggcctgatccccaaattcatc
aaccgcaagcacggccgcgaggccatcgacgtggcccacgccaagctggagccgatcctc
aaggagacctacgggatcatggtctaccaggagcagatcatgcggatcgcccaggatctg
gccggctattccctcggtgaagccgatctgctgcggcgggcgatgggcaagaagaaggtg
tcggagatgcagaagcatcgccaccagttcgtcaccggcgctaccgaacgcggcgttgag
gccgccattgccgaagccctgttcgaccagatggtgctgttcgccgagtactgcttcaac
aagagccactccaccgcctacggcgccgtcacctaccagaccgcctacctcaaggcccac
catccggtggcctacatggcggccctgctcacggtgaatgcgggcaccaccgacaaggtg
cagcgctacatcgccaactgccaggccatgggcatcgaggtgatgccgccggacgtcaat
gcctccggcatcgacttcacgcccgtgggcaagaagatcctcttcggcctctccgccgtc
cgcaacctgggggacggcgccatccgccagttgatcgaggcccgctccagcggcggccct
ttcctgcacctggccgatctctgcgaccggatccccggccagcagctcaaccgccgggcg
atcgagtccctgatccactgcggggccctcgatggcctggagccgaaggccaatcgggcc
cagctgatggccgacctcgatctggtgctcgactgggccagctcccgcgcccgcgaccgg
gccagcggccaggggaatctgtttgacctgttcggcggcggtgctgcgggtgcttcggag
ggcgccgccgccgtggaggcccctgccccgcccaaggccgctccggtggccgactatccc
cccactgagaagctgaagctggagaaggagctgctgggcttctacatctccgaccacccc
ctgcgccaactcgcctcccaggtgcggctgctcacgccgatcggcctggccaatctcgag
gagatggccgacaaggccaaggtgagcgtggtggtgatggtgagcgagatccgtccggtg
accacccgcaagggggaccgcatggccgtgctccagctggaggatctcaccggagcctgc
gaggcggtggtgttccccaagagctacgcccgcctggccgatcacctgatggtggatgcc
cggctgctgctctgggccggtgtcgaccgccgcgacgaccgggtgcagctgctcgtggac
gactgccgcagcatcgaggatctgcagctggtgatggtggaactggcccctgagcaggcc
ggagacatcgccgtccagcaccgcctgcgggaatgcctcacccgccaccgtcctggccag
gaggaggcgggggtgcgggtgccggtggtggcgctggtgaagcaccaggatgaaacacgc
ttcgtgcgcctgggaggccagttctgcgtcgccgatgcgtcggcggccgtgcagaccctg
gcctcggccgacttcagggcctggctgcgctcacccctggggagtgcctga
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