Cyanobium gracile: Cyagr_0580
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Entry
Cyagr_0580 CDS
T02359
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cgc
Cyanobium gracile
Pathway
cgc00300
Lysine biosynthesis
cgc00470
D-Amino acid metabolism
cgc01100
Metabolic pathways
cgc01110
Biosynthesis of secondary metabolites
cgc01120
Microbial metabolism in diverse environments
cgc01230
Biosynthesis of amino acids
Module
cgc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cgc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Cyagr_0580
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cyagr_0580
Enzymes [BR:
cgc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Cyagr_0580
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AFY27771
UniProt:
K9P4Y7
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All DBs
Position
complement(594329..595438)
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AA seq
369 aa
AA seq
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MLQVLQFSKYQGLGNDFLLLDGRSLEDPEGLFGLTPERVQRLCDRRFGVGGDGVILALPP
REGGELRMRIFNADGTEPEMCGNGIRCLARFLADSDGDQAPRSWEIETLAGRMVPALAED
GRIRVDMGPPFLTPESVPTTLAVGEQGLPVGELEVLGQRLAVAAAGMGNPHAVVPVADVA
AIDLEGLGAALELHGAFPARTNVHFVQVLAPDHLVMRVWERGAGPTLACGTGACATLVAC
HRLGLAARHARLDLPGGPLEIHWDKASGHVFMTGPAEAVFDGVVAPSLFGEDGAQPPALA
VAAPSSTIDCATACVNGCLRPEACPSAEARARVTALLEGRSLDDLVALAGESLESRTRGR
LSRDVSAAT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcaggtgctccaattcagcaaataccagggtctgggaaatgacttcttgctcctt
gacggccgcagcttagaggatcctgagggcctgttcggcctgacgcctgaacgggtgcag
cggctctgcgaccgccgcttcggggtgggcggggatggggtgatcctggccctgccgccc
agggagggcggtgaactgcggatgcggatcttcaacgccgacggcaccgagccggagatg
tgcggcaacggcatccgctgtctggcccgtttcctggcggacagcgacggcgaccaggct
ccgcggagctgggagatcgagaccctcgccggtcgcatggtgccggccctggccgaggac
ggtcgcattcgcgtcgacatgggcccgccgttcctgacccccgagagcgtgcccaccacc
ctggccgtgggggagcaggggctgccggtgggtgagctggaggtgctgggccagcgcctg
gcggtggcggccgccggcatgggcaacccccacgccgtcgtgcccgtcgccgacgtggcg
gcgatcgatctggagggcctcggcgccgcccttgagttgcacggggcctttccggcccgc
accaacgtccacttcgtccaggtgctcgcccccgaccatctggtgatgcgggtctgggag
cggggggcggggcccaccctggcctgcggaacgggcgcctgcgccaccctggtggcctgc
catcggctcgggctggccgcccgccacgcccggctcgatctgccgggggggcccctggag
atccattgggacaaggccagcggccacgtgttcatgaccggtccggcggaggcggtgttc
gacggggtcgtggccccgtcgctgttcggcgaggacggggcgcagcctcccgccctggcg
gtggcagcgccgtccagcaccatcgattgcgccaccgcctgcgtcaacggctgcctgcgg
ccggaggcctgccccagcgccgaagcccgagcccgcgtcacggccctgctggagggtcgc
tccctcgacgacctggtggccctggcgggcgaatccctggaatcccgcacccggggccgc
ctctcccgcgatgtctccgccgccacctga
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