KEGG   Cyanobium gracile: Cyagr_0700
Entry
Cyagr_0700        CDS       T02359                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cgc  Cyanobium gracile
Pathway
cgc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Cyagr_0700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgc03019]
    Cyagr_0700
Enzymes [BR:cgc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Cyagr_0700
Messenger RNA biogenesis [BR:cgc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Cyagr_0700
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AFY27888
UniProt: K9P4I7
LinkDB
Position
724291..725553
AA seq 420 aa
MAGLATDFAVLGLSEPILKAVAAKGYSSPSPIQRQCIPAVLAGHDVMAAAQTGTGKTAGF
TLPMLERLRHGPHARAGVVRALVLTPTRELAAQVADSVTAYGRYLDLRSDVVFGGVSANP
QMQRLRRGADVLVATPGRLMDLHQQNALRLDRVEILVLDEADRMLDMGFIRDIRRILSLL
PAKRQNLLFSATFSTEIRRLATGLLHTPVQLQATPENQAAPLVEQVIHPCDMDRKGDLLS
HLIRTNDWGQVLVFSRTKHGANRLAERLEKEGLGAAAIHGNKSQGARTRALAEFKSGEVR
VLVATDIAARGIDIHQLPHVVNLDLPNVAEDYVHRIGRTGRAGQNGHAISLVAAEEHELL
RAIERLVGSPLPRQEVAGFEPTVLSAPPLDLSGGRGRRSQGPRHGQGQGHERGRRRSGSR
NT seq 1263 nt   +upstreamnt  +downstreamnt
gtggccggactggcgacggatttcgccgtgttgggtctctcggagccgatcctcaaggcc
gtggccgccaagggctacagcagcccctccccgatccagcggcaatgcatccccgccgtg
ctggcgggccacgacgtgatggcggccgcccagacgggcaccggcaagacggccggcttc
accctgccgatgctggaacggctgcgccacggtccccatgcccgcgcgggcgtggtgcgg
gccctggtgctgacgcccacccgcgagctggcggcccaggtggcggacagcgtcaccgcc
tacggccgctacctggatctgcgctccgacgttgtcttcggtggcgtgagcgccaacccc
cagatgcagcggctccgccgcggtgccgatgtgctggtggccacccccggccggctgatg
gacctgcaccagcagaacgccctgcggctcgaccgggtcgagatcctggtgctcgatgaa
gccgaccggatgctcgacatgggcttcatccgcgacatccgccggatcctctccctgctc
ccggcgaagcgtcagaacctgctgttctcagccaccttctccaccgagatccgccggctg
gccacgggcctgctgcacaccccggtgcagctccaggccacgcccgagaaccaggccgca
cccctggtggagcaggtgatccatccctgcgacatggaccgcaagggggatctgctcagc
cacctgatccgcaccaacgactggggtcaggtgctggtgttctcccgcaccaagcacggc
gccaaccggctggcagaacggctcgagaaggaggggctcggggcggcggcgatccacggc
aacaagagccagggggcccgcacccgggcgctggcggagttcaagagcggcgaggtgcgg
gtgctggtggccaccgacatcgccgcccgcggcatcgacatccaccagctgccccacgtg
gtcaacctcgacctgcccaacgtggccgaggactacgtgcaccgcatcggccgcaccggc
cgggcgggccagaacggccatgccatttccctggtggcggccgaagagcatgagctgctg
cgggccatcgaacgcctggtcggctcccccctgccccgccaggaggtggcgggcttcgag
cccaccgtgctctccgccccgcccctggatctcagtggcggccggggacgccgcagccag
ggcccccgccacgggcagggccagggccacgagcgcggccggcgccgcagcggttcccgc
tga

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