Cyanobium gracile: Cyagr_0715
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Entry
Cyagr_0715 CDS
T02359
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cgc
Cyanobium gracile
Pathway
cgc03410
Base excision repair
cgc03430
Mismatch repair
cgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cyagr_0715
03430 Mismatch repair
Cyagr_0715
03440 Homologous recombination
Cyagr_0715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgc03400
]
Cyagr_0715
DNA repair and recombination proteins [BR:
cgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cyagr_0715
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cyagr_0715
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cyagr_0715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFY27903
UniProt:
K9P4J8
LinkDB
All DBs
Position
complement(738110..740026)
Genome browser
AA seq
638 aa
AA seq
DB search
MLPAADERRWLLPSPFGGDGPAEAAGTVDTDLPAELLALLRRRGLLTTEAVRRLLDPEAA
PDPEAHFPGLAVAVERLVRGCQRAEAVAICGDYDADGMTSTALLVGVLQRLGALPQAAIP
SRMDDGYGLNAAMVERLAAEGVRLLITVDNGVAAIEALERAAALEVEVILTDHHTLPPQL
PPHLALLHPAVTPEGSPYRGLAGVGLAHVLATALCRRLRHRHGLEIALNLFCIGTIADMA
PLEGVNRRWLLDGLPLLGRSPLPGLQALQQLAGLEKHRVDAEAVGFQLAPRINAVGRLGD
PQLVVDLLTTEDPERALELARSCEALNRQRRELCSAIEAEALALLEADGPRRPAFLLLAQ
GHWHHGVIGIVASRLVERFGRPVALLAGEGGGRLRASVRAPKGFAVDAALTACAELLERH
GGHPAAGGFTVRAENVAALQERLDALAGRWLEAAGDGRTVEPEALLRLDRIDREFWRQLQ
RLAPFGIGHPTPLFWSSRCQVVEQKLLRGGHLQLQLAQGEARLRAIGWRWQGPEQWQGPV
DVAYRLRRDDWQGVERFQLELEAIRCSGGDTVVLQRRNRTYWCRRQGDSLVIRNAAGEEL
RSAFPADGADPAALVDPPHPYVQGLMREAAMALGMVEG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgctccctgccgccgacgagcgacgctggctgctgccctcccccttcggtggcgacggc
cccgccgaagcggccgggactgtggacacggaccttcccgctgagctgctggccctgctg
aggcgtcgcggcctgctgacgacggaggcggtccgccgcctgctcgatcccgaggcggcc
cccgacccggaggcccatttccccggcctggcggtggcggtcgagcggctggtgcgcggc
tgccagagggctgaggcggtggcgatctgcggcgactacgacgccgatggcatgaccagc
accgccctgctggtgggggttctccagcggctcggcgccctcccgcaggcggccatcccc
agccgcatggacgacggctacggcctcaacgccgccatggtggagcggctggcggccgag
ggggtgcggctgctgatcacggtggacaacggcgtggccgccatcgaggccctggagcgc
gccgccgccctggaggtggaggtgatcctcaccgaccaccacaccctgcccccccagctg
ccgccgcacctggccctgctgcacccggccgtcaccccggagggctccccctaccggggt
ctggcgggggtggggctggcccacgtgctggccaccgccctctgccggcggctgcggcac
cgccacgggctggagatcgccctcaacctgttctgcatcggcaccatcgccgacatggcc
cccctggagggggtgaaccgccgctggctgctcgatggcctgcccctgctgggccgcagc
cccctgcccggactgcaggccctgcagcagctggcgggtctggagaagcaccgggtcgat
gcggaggcggtgggcttccagctggccccgcgcatcaacgccgtcggccgactgggggac
ccccagctggtggtggacctgctgacgaccgaggatcccgagcgggccctggagctggcc
cgctcctgcgaagccctcaatcgccagcgacgcgaactctgcagcgcgatcgaggcggag
gccctggccctgctggaggccgacggtccacgacggcccgccttcctgctgctggcccag
ggccactggcaccacggcgtcatcggcatcgtcgcctcccggctggtggagcgcttcggc
cgtccggtggccctgctcgccggcgaagggggaggccggctgcgggcgtcggtgcgggcc
ccgaagggctttgccgtcgatgcggccctgacggcctgcgccgagctgctggagcgccac
ggcggccatcccgccgccggcggtttcacggtgcgggccgagaacgtcgcggccctgcag
gaacggctcgatgccctggccggccgctggcttgaggcggcgggcgatggccgcacggtg
gagcccgaggccctgctgcgattggaccgcatcgaccgggagttctggcgccagctccag
cgcctggcccccttcggcatcggccatcccacgcccctgttctggagcagccgctgtcag
gtggtggagcagaagttgctgcgcggcggccaccttcagctgcagctggcccagggggag
gcgcggctgcgggcgatcggctggcgctggcaggggcctgagcagtggcagggaccggtg
gatgtggcttaccgcctgcgccgcgatgactggcagggggtggagcggttccagctggag
ctggaggcgatccgctgcagcggcggtgacaccgtggtgctgcagcgtcgcaaccgcacc
tactggtgccgccgccagggggacagcctggtgatccgcaacgccgccggcgaggagctg
cgctccgccttcccggccgacggcgccgaccctgccgctctggtggatcccccccacccc
tacgttcaggggctgatgcgggaggcggccatggccctggggatggtcgaaggatga
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