Cyanobium gracile: Cyagr_2208
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Entry
Cyagr_2208 CDS
T02359
Name
(GenBank) Holliday junction DNA helicase, RuvB subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cgc
Cyanobium gracile
Pathway
cgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cyagr_2208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgc03400
]
Cyagr_2208
Enzymes [BR:
cgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyagr_2208
DNA repair and recombination proteins [BR:
cgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cyagr_2208
RecFOR pathway proteins
Cyagr_2208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
AAA_22
AAA_3
nSTAND3
AAA_14
TsaE
Rad17
AAA_25
AAA_18
AAA_33
AAA_24
DUF815
AAA_17
Sigma54_activ_2
AAA_28
IstB_IS21
RNA_helicase
DUF2388
NB-ARC
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AFY29321
UniProt:
K9P9F3
LinkDB
All DBs
Position
complement(2138406..2139476)
Genome browser
AA seq
356 aa
AA seq
DB search
MAIISSGGTAAPAPRGQRSGAAPERLVDPTAAVEEPPVREDGLRPRRLDDYIGQSELKQV
LRIAVEATRRRQEALDHVLLYGPPGLGKTTMALVLAEELGVRCRITSAPALERPRDIVGL
LVNLQPREVLFIDEIHRLNRVAEEILYPAMEDFRLDLTVGKGTTARTRSLEVAPFTLVGA
TTRAGSLSSPLRDRFGLIQRLEFYGLDDLEAIVQRAAGLLQLALQPCAAQEVARRCRGTP
RIANRLLRRVRDVAAVGGHGRIDAALVEEALSLHRVDGRGLDASDRRLLGLMLEAYGGGP
VGLETLAAGLGEDPATLEAVVEPYLLQLGFLQRTPRGRVVTSAGRAHLDGAGPAAA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcatctcttcgggaggaacggccgcacccgctccccgggggcagcggtccggg
gcggctccggagcggctcgtggaccccaccgctgctgtcgaggagccccccgtgcgggag
gacggcctgcggccccgccggctggatgactacatcggccagagcgagctgaagcaggtg
ctgcgcatcgccgtggaggccacccgccgccgccaggaggccctcgaccatgtgctgctc
tacggcccccccggcctcggcaagaccaccatggccctggtgctggccgaggagctgggg
gtgcgctgccggatcaccagcgccccggccctggagcgcccgcgcgacatcgtcggcctg
ctggtgaacctgcagccccgcgaggtgctgttcatcgatgagatccaccgcctcaaccgg
gtggccgaggagatcctctaccccgccatggaggacttccgcctcgacctcaccgtcggc
aagggcaccacggcccgcacccgcagcctggaggtggccccgttcaccctggtgggggcc
accacccgcgccggctcgctgagctcgccgctgcgggatcgcttcggcctgatccagcgg
ctggagttctacggcctcgatgacctcgaggcgatcgtgcagcgggccgccggcctgctg
cagctggccctgcagccctgcgccgcccaggaggtggcccgccgctgccggggcacgccg
cgcatcgccaaccggctgctgcgccgggtgcgggacgtggcggcggtggggggccacggc
cggatcgatgcggcactcgtggaggaggccctctccctgcaccgggtggacgggcgcggc
ctggatgccagcgaccggcgcctgctgggcctgatgctggaggcctacggcggcgggccg
gtgggtctggaaaccctggcggcggggctgggggaggatcccgccaccctcgaagcggtg
gtggagccctacctgctgcagctgggcttcctgcagcgcacgccccgggggcgggtcgtc
acctccgccgggcgcgcccacctggacggggctggtccggcggcggcctga
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